Runx2os1 MGI Mouse Gene Detail - MGI:3641707 - runt related transcription factor 2, opposite strand 1

Sequence Map

Chr17:45046732-45048499 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641707	antisense lncRNA gene	Chr17:45046732-45048499 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003409	antisense lncRNA gene	Chr17:45710010-45711781 (+)
A/J	MGP_AJ_G0003387	antisense lncRNA gene	Chr17:44644430-44646170 (+)
AKR/J	MGP_AKRJ_G0003368	antisense lncRNA gene	Chr17:44922453-44924221 (+)
BALB/cJ	MGP_BALBcJ_G0003376	antisense lncRNA gene	Chr17:44521830-44523578 (+)
C3H/HeJ	MGP_C3HHeJ_G0003326	antisense lncRNA gene	Chr17:45632030-45633778 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003516	antisense lncRNA gene	Chr17:47710615-47712382 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003030	antisense lncRNA gene	Chr17:41447507-41449241 (+)
CAST/EiJ	MGP_CASTEiJ_G0003288	antisense lncRNA gene	Chr17:45707658-45709409 (+)
CBA/J	MGP_CBAJ_G0003322	antisense lncRNA gene	Chr17:49389296-49391063 (+)
DBA/2J	MGP_DBA2J_G0003331	antisense lncRNA gene	Chr17:43437389-43439141 (+)
FVB/NJ	MGP_FVBNJ_G0003349	antisense lncRNA gene	Chr17:43002839-43004605 (+)
LP/J	MGP_LPJ_G0003403	antisense lncRNA gene	Chr17:46375668-46377412 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003337	antisense lncRNA gene	Chr17:48987336-48989104 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003518	antisense lncRNA gene	Chr17:45285985-45287742 (+)
PWK/PhJ	MGP_PWKPhJ_G0003247	antisense lncRNA gene	Chr17:42721066-42722841 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003192	antisense lncRNA gene	Chr17:42149180-42150948 (+)
WSB/EiJ	MGP_WSBEiJ_G0003325	antisense lncRNA gene	Chr17:45804586-45806343 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	ENSMUSG00000073394	Ensembl Gene Model \| MGI Sequence Detail	1768	C57BL/6J	± kb
transcript	ENSMUST00000097320	Ensembl \| MGI Sequence Detail	792	Not Applicable
polypeptide	Q3TXX5	UniProt \| EBI \| MGI Sequence Detail	183	Not Applicable

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Summaries

All 7
Earliest

J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
Latest

J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;

TSS for Runx2os1:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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