Gm10855 Gene Detail

Summary

• Symbol
  Gm10855
• Name
  predicted gene 10855

• Feature Type
  lncRNA gene
• IDs
  MGI:3641819
  NCBI Gene: 100038708
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:6937352-6939892 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 3.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641819	lncRNA gene	Chr2:6937352-6939892 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0036935	sense intronic lncRNA gene	Chr2:4121432-4123972 (-)
A/J	MGP_AJ_G0036923	sense intronic lncRNA gene	Chr2:3927257-3929797 (-)
AKR/J	MGP_AKRJ_G0036870	sense intronic lncRNA gene	Chr2:4059713-4062253 (-)
BALB/cJ	MGP_BALBcJ_G0036914	sense intronic lncRNA gene	Chr2:3918772-3921312 (-)
C3H/HeJ	MGP_C3HHeJ_G0036600	sense intronic lncRNA gene	Chr2:3998584-4001124 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037427	sense intronic lncRNA gene	Chr2:4232847-4235387 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034486	sense intronic lncRNA gene	Chr2:3699221-3701767 (-)
CAST/EiJ	MGP_CASTEiJ_G0035789	sense intronic lncRNA gene	Chr2:4058180-4060726 (-)
CBA/J	MGP_CBAJ_G0036575	sense intronic lncRNA gene	Chr2:4421743-4424283 (-)
DBA/2J	MGP_DBA2J_G0036751	sense intronic lncRNA gene	Chr2:3875129-3877669 (-)
FVB/NJ	MGP_FVBNJ_G0036701	sense intronic lncRNA gene	Chr2:3864613-3867153 (-)
LP/J	MGP_LPJ_G0036798	sense intronic lncRNA gene	Chr2:4064046-4066586 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036708	sense intronic lncRNA gene	Chr2:4207983-4210523 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037544	sense intronic lncRNA gene	Chr2:4054169-4056709 (-)
PWK/PhJ	MGP_PWKPhJ_G0035482	sense intronic lncRNA gene	Chr2:3869747-3872258 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035294	sense intronic lncRNA gene	Chr2:4031267-4033807 (-)
WSB/EiJ	MGP_WSBEiJ_G0035989	sense intronic lncRNA gene	Chr2:4081100-4083640 (-)

Homology

• Gene Tree
  Gm10855
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000075538 (Evidence)
• NCBI Gene
  100038708

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000075538	Ensembl Gene Model | MGI Sequence Detail	2541	C57BL/6J
transcript	ENSMUST00000100426	Ensembl | MGI Sequence Detail	2541	Not Applicable
polypeptide	Q3TYJ8	UniProt | EBI | MGI Sequence Detail	179	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;