D030062O11Rik Gene Detail

Summary

• Symbol
  D030062O11Rik
• Name
  RIKEN cDNA D030062O11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3641918
  NCBI Gene: 100038531
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:87611338-87614143 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641918	lncRNA gene	Chr9:87611338-87614143 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002335	unclassified gene	Chr9:88585835-88588640 (+)
A/J	MGP_AJ_G0002312	unclassified gene	Chr9:85490399-85493198 (+)
AKR/J	MGP_AKRJ_G0002298	unclassified gene	Chr9:87504074-87506878 (+)
BALB/cJ	MGP_BALBcJ_G0002306	unclassified gene	Chr9:85124023-85126822 (+)
C3H/HeJ	MGP_C3HHeJ_G0002283	unclassified gene	Chr9:87986248-87989047 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002432	unclassified gene	Chr9:91005502-91008307 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002039	unclassified gene	Chr9:84223622-84226411 (+)
CAST/EiJ	MGP_CASTEiJ_G0002247	unclassified gene	Chr9:88443776-88446579 (+)
CBA/J	MGP_CBAJ_G0002277	unclassified gene	Chr9:94182329-94185134 (+)
DBA/2J	MGP_DBA2J_G0002280	unclassified gene	Chr9:85024632-85027431 (+)
FVB/NJ	MGP_FVBNJ_G0002289	unclassified gene	Chr9:84101654-84104453 (+)
LP/J	MGP_LPJ_G0002334	unclassified gene	Chr9:88826333-88829138 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002264	unclassified gene	Chr9:95827097-95829901 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002420	unclassified gene	Chr9:87640278-87643077 (+)
PWK/PhJ	MGP_PWKPhJ_G0002207	unclassified gene	Chr9:85191370-85194174 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002168	unclassified gene	Chr9:87803545-87806345 (+)
WSB/EiJ	MGP_WSBEiJ_G0002275	unclassified gene	Chr9:87667720-87670519 (+)

Homology

• Gene Tree
  D030062O11Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• UniProt
  1

• Ensembl
  ENSMUSG00000103710 (Evidence)
• NCBI Gene
  100038531

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103710	Ensembl Gene Model | MGI Sequence Detail	2806	C57BL/6J
transcript	AK141776	GenBank | ENA | DDBJ | MGI Sequence Detail	2810	C57BL/6J
polypeptide	Q3UR58	UniProt | EBI | MGI Sequence Detail	124	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 8
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;