Gm10647 Gene Detail

Summary

• Symbol
  Gm10647
• Name
  predicted gene 10647

• Feature Type
  protein coding gene
• IDs
  MGI:3642036
  NCBI Gene: 100038381
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:66704321-66706356 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 36.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642036	protein coding gene	Chr9:66704321-66706356 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0034980	protein coding gene	Chr9:66663628-66665660 (+)
A/J	MGP_AJ_G0034960	protein coding gene	Chr9:64355607-64357642 (+)
AKR/J	MGP_AKRJ_G0034890	protein coding gene	Chr9:65890043-65892078 (+)
BALB/cJ	MGP_BALBcJ_G0034953	protein coding gene	Chr9:64089680-64091715 (+)
C3H/HeJ	MGP_C3HHeJ_G0034662	protein coding gene	Chr9:66425631-66427666 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0035472	protein coding gene	Chr9:68490834-68492869 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032383	protein coding gene	Chr9:63996820-63999230 (+)
CAST/EiJ	MGP_CASTEiJ_G0033984	protein coding gene	Chr9:66652802-66654830 (+)
CBA/J	MGP_CBAJ_G0034634	protein coding gene	Chr9:70833135-70835170 (+)
DBA/2J	MGP_DBA2J_G0034794	protein coding gene	Chr9:64128016-64130051 (+)
FVB/NJ	MGP_FVBNJ_G0034735	protein coding gene	Chr9:63471394-63473440 (+)
LP/J	MGP_LPJ_G0034876	protein coding gene	Chr9:66942486-66944518 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0034777	protein coding gene	Chr9:72062165-72064200 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0035494	protein coding gene	Chr9:66007287-66009322 (+)
PWK/PhJ	MGP_PWKPhJ_G0033688	protein coding gene	Chr9:64347228-64349275 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0034097	protein coding gene	Chr9:65905894-65907926 (+)

Homology

• Gene Tree
  Gm10647
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10647
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  5 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• UniProt
  1

• Ensembl
  ENSMUSG00000074232 (Evidence)
• NCBI Gene
  100038381

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074232	Ensembl Gene Model | MGI Sequence Detail	2036	C57BL/6J
transcript	AK149255	GenBank | ENA | DDBJ | MGI Sequence Detail	2036	C57BL/6J
polypeptide	Q3UEY6	UniProt | EBI | MGI Sequence Detail	124	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 10

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;