About   Help   FAQ
M5C1000I18Rik Gene Detail
Summary
  • Symbol
    M5C1000I18Rik
  • Name
    RIKEN cDNA M5C1000I18 gene
Location &
Maps
more
  • Sequence Map
    Chr9:67665995-67667512 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 36.72 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    154 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642038
 lncRNA gene Chr9:67665994-67667512 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007448
 lincRNA gene Chr9:67671480-67672998 (-)
A/J MGP_AJ_G0007443
 lincRNA gene Chr9:65346515-65348033 (-)
AKR/J MGP_AKRJ_G0007416
 lincRNA gene Chr9:66893125-66894643 (-)
BALB/cJ MGP_BALBcJ_G0007421
 lincRNA gene Chr9:65084072-65085590 (-)
C3H/HeJ MGP_C3HHeJ_G0007365
 lincRNA gene Chr9:67440752-67442270 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007592
 lincRNA gene Chr9:69521080-69524300 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006781
 lincRNA gene Chr9:64970416-64971937 (-)
CAST/EiJ MGP_CASTEiJ_G0007269
 lincRNA gene Chr9:67664091-67665619 (-)
CBA/J MGP_CBAJ_G0007347
 lincRNA gene Chr9:71909644-71911162 (-)
DBA/2J MGP_DBA2J_G0007371
 lincRNA gene Chr9:65093546-65095064 (-)
FVB/NJ MGP_FVBNJ_G0007389
 lincRNA gene Chr9:64434327-64435850 (-)
LP/J MGP_LPJ_G0007453
 lincRNA gene Chr9:67942674-67944192 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007369
 lincRNA gene Chr9:73087298-73088816 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007596
 lincRNA gene Chr9:67016120-67017638 (-)
PWK/PhJ MGP_PWKPhJ_G0007210
 lincRNA gene Chr9:65333537-65335061 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007114
 lincRNA gene Chr9:67315537-67316893 (-)
WSB/EiJ MGP_WSBEiJ_G0007329
 lincRNA gene Chr9:66911249-66912767 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102633151 NCBI Gene Model | MGI Sequence Detail 1518 C57BL/6J ±  kb
transcript NR_153961 RefSeq | MGI Sequence Detail 1414 C57BL/6  
polypeptide Q3UHS1 UniProt | EBI | MGI Sequence Detail 122 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory