Gm15361 Pseudogene Detail

Summary

• Symbol
  Gm15361
• Name
  predicted pseudogene 15361
• Synonyms
  ENSMUSG00000059611

• Feature Type
  pseudogene
• IDs
  MGI:3642247
  NCBI Gene: 100041484
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:73537985-73538428 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642247	pseudogene	ChrX:73536981-73538615 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011561	pseudogene	Chr2:21273601-21274025 (+)
A/J	MGP_AJ_G0014524	pseudogene	ChrX:70498539-70498982 (-)
AKR/J	MGP_AKRJ_G0014451	pseudogene	ChrX:72394839-72395282 (-)
BALB/cJ	MGP_BALBcJ_G0014479	pseudogene	ChrX:69510697-69517761 (-)
C3H/HeJ	MGP_C3HHeJ_G0014310	pseudogene	ChrX:70780211-70780654 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014948	pseudogene	ChrX:72494041-72494484 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011223	pseudogene	Chr2:20958909-20959321 (+)
CBA/J	MGP_CBAJ_G0014296	pseudogene	ChrX:74485865-74486308 (-)
DBA/2J	MGP_DBA2J_G0014377	pseudogene	ChrX:69945795-69946238 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0014472	pseudogene	ChrX:71097826-71098269 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0011082	pseudogene	Chr2:20126217-20126730 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0011247	pseudogene	Chr2:21167932-21168355 (+)

Homology

• Gene Tree
  Gm15361
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000083283 (Evidence)
• NCBI Gene
  100041484

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083283	Ensembl Gene Model | MGI Sequence Detail	444	C57BL/6J
transcript	ENSMUST00000119320	Ensembl | MGI Sequence Detail	444	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm15361:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163648	ChrX:73538571-73538586 (-)	-151 bp