Gm16510 Pseudogene Detail

Summary

• Symbol
  Gm16510
• Name
  predicted pseudogene 16510

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3642319
  NCBI Gene: 101056075
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:70448972-70449220 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 41.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  124 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642319	pseudogene	Chr2:70448887-70449390 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011688	pseudogene	Chr2:70672585-70672833 (-)
A/J	MGP_AJ_G0011684	pseudogene	Chr2:67923968-67924216 (-)
AKR/J	MGP_AKRJ_G0011650	pseudogene	Chr2:69769488-69769736 (-)
BALB/cJ	MGP_BALBcJ_G0011665	pseudogene	Chr2:68113816-68114064 (-)
C3H/HeJ	MGP_C3HHeJ_G0011551	pseudogene	Chr2:69995190-69995438 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011959	pseudogene	Chr2:72800089-72800337 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010472	pseudogene	Chr2:65156800-65157048 (-)
CAST/EiJ	MGP_CASTEiJ_G0011340	pseudogene	Chr2:70155941-70156189 (-)
CBA/J	MGP_CBAJ_G0011524	pseudogene	Chr2:75490825-75491073 (-)
DBA/2J	MGP_DBA2J_G0011577	pseudogene	Chr2:67558539-67558787 (-)
FVB/NJ	MGP_FVBNJ_G0011582	pseudogene	Chr2:66936239-66936487 (-)
LP/J	MGP_LPJ_G0011644	pseudogene	Chr2:70526532-70526780 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011581	pseudogene	Chr2:77512054-77512302 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011953	pseudogene	Chr2:69866417-69866665 (-)
PWK/PhJ	MGP_PWKPhJ_G0011197	pseudogene	Chr2:67417616-67417864 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011017	pseudogene	Chr2:70073378-70073626 (-)
WSB/EiJ	MGP_WSBEiJ_G0011368	pseudogene	Chr2:70302292-70302540 (-)

Homology

• Gene Tree
  Gm16510
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm16510
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000086699 (Evidence)
• NCBI Gene
  101056075

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086699	Ensembl Gene Model | MGI Sequence Detail	249	C57BL/6J
transcript	ENSMUST00000153501	Ensembl | MGI Sequence Detail	249	Not Applicable
polypeptide	XP_036018679	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;