Gm10156 Pseudogene Detail

Summary

• Symbol
  Gm10156
• Name
  predicted gene 10156
• Synonyms
  EG626661

• Feature Type
  pseudogene
• IDs
  MGI:3642344
  NCBI Gene: 626661
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:107462246-107462707 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 57.21 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642344	pseudogene	Chr7:107462172-107463189 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0011649	pseudogene	Chr2:68911001-68911376 (-)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0011549	pseudogene	Chr2:69149894-69150994 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011522	pseudogene	Chr2:74556316-74556874 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0011580	pseudogene	Chr2:66112847-66113222 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0011580	pseudogene	Chr2:76619712-76620087 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011951	pseudogene	Chr2:69005646-69006021 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0012285	pseudogene	Chr5:63732495-63732956 (+)
WSB/EiJ	MGP_WSBEiJ_G0011367	pseudogene	Chr2:69433177-69433555 (-)

Homology

• Gene Tree
  Gm10156
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm10156
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13
• RefSeq
  1

• Ensembl
  ENSMUSG00000066245 (Evidence)
• NCBI Gene
  626661

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066245	Ensembl Gene Model | MGI Sequence Detail	462	C57BL/6J
transcript	ENSMUST00000122364	Ensembl | MGI Sequence Detail	462	Not Applicable

Other
Accession IDs

MGI:3645622

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

TSS for Gm10156:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr68454	Chr7:107462167-107462174 (+)	-75 bp