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Gm9961 Gene Detail
Summary
  • Symbol
    Gm9961
  • Name
    predicted gene 9961
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642444
    NCBI Gene: 791359
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr16:11719228-11748458 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 6.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    894 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642444
 lncRNA gene Chr16:11719227-11748464 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022527
 protein coding gene Chr16:8805543-8835583 (+)
A/J MGP_AJ_G0022489
 protein coding gene Chr16:8312275-8341510 (+)
AKR/J MGP_AKRJ_G0022465
 protein coding gene Chr16:8694932-8724140 (+)
BALB/cJ MGP_BALBcJ_G0022493
 protein coding gene Chr16:8457157-8486258 (+)
C3H/HeJ MGP_C3HHeJ_G0022260
 protein coding gene Chr16:8760356-8790607 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022942
 protein coding gene Chr16:8944821-8975595 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020462
 protein coding gene Chr16:8474359-8503398 (+)
CAST/EiJ MGP_CASTEiJ_G0021787
 protein coding gene Chr16:8793186-8823507 (+)
CBA/J MGP_CBAJ_G0022229
 protein coding gene Chr16:9358828-9388776 (+)
DBA/2J MGP_DBA2J_G0022360
 protein coding gene Chr16:8324184-8353435 (+)
FVB/NJ MGP_FVBNJ_G0022336
 protein coding gene Chr16:8318400-8347704 (+)
LP/J MGP_LPJ_G0022428
 protein coding gene Chr16:8743521-8775142 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022358
 protein coding gene Chr16:9020503-9049583 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022955
 protein coding gene Chr16:8644119-8673301 (+)
PWK/PhJ MGP_PWKPhJ_G0021527
 protein coding gene Chr16:8555250-8584121 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021357
 protein coding gene Chr16:8695976-8730189 (+)
WSB/EiJ MGP_WSBEiJ_G0021835
 protein coding gene Chr16:8726305-8755710 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 791359 NCBI Gene Model | MGI Sequence Detail 29231 C57BL/6J ±  kb
transcript NR_033509 RefSeq | MGI Sequence Detail 540 C57BL/6  
polypeptide Q8BNV2 UniProt | EBI | MGI Sequence Detail 113 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory