Gm9848 Pseudogene Detail

Summary

• Symbol
  Gm9848
• Name
  predicted gene 9848

• Feature Type
  pseudogene
• IDs
  MGI:3642450
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:113244607-113244865 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 63.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642450	pseudogene	Chr13:113244607-113244865 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011067	pseudogene	Chr13:115724478-115724736 (+)
A/J	MGP_AJ_G0011065	pseudogene	Chr13:111105192-111105450 (+)
AKR/J	MGP_AKRJ_G0011022	pseudogene	Chr13:114441824-114442082 (+)
BALB/cJ	MGP_BALBcJ_G0011041	pseudogene	Chr13:111788828-111789086 (+)
C3H/HeJ	MGP_C3HHeJ_G0010939	pseudogene	Chr13:114235755-114236013 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011320	pseudogene	Chr13:119153796-119154054 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009912	pseudogene	Chr13:106398880-106399138 (+)
CAST/EiJ	MGP_CASTEiJ_G0010759	pseudogene	Chr13:113889012-113889270 (+)
CBA/J	MGP_CBAJ_G0010912	pseudogene	Chr13:123742209-123742467 (+)
DBA/2J	MGP_DBA2J_G0010957	pseudogene	Chr13:110806642-110806900 (+)
FVB/NJ	MGP_FVBNJ_G0010970	pseudogene	Chr13:109510793-109511051 (+)
LP/J	MGP_LPJ_G0011046	pseudogene	Chr13:115765413-115765671 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010953	pseudogene	Chr13:124020013-124020271 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011302	pseudogene	Chr13:113939655-113939913 (+)
PWK/PhJ	MGP_PWKPhJ_G0010635	pseudogene	Chr13:109575180-109575438 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010811	pseudogene	Chr13:114506996-114507254 (+)

Homology

• Gene Tree
  Gm9848
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000051002 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000051002	Ensembl Gene Model | MGI Sequence Detail	259	C57BL/6J
transcript	ENSMUST00000053398	Ensembl | MGI Sequence Detail	259	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;