F420014N23Rik MGI Mouse Gene Detail - MGI:3642477

Sequence Map

Chr10:127031118-127038512 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642477	lncRNA gene	Chr10:127031118-127038512 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005162	lincRNA gene	Chr10:130777678-130786102 (+)
A/J	MGP_AJ_G0005145	lincRNA gene	Chr10:125540425-125547819 (+)
AKR/J	MGP_AKRJ_G0005123	lincRNA gene	Chr10:129255198-129262594 (+)
BALB/cJ	MGP_BALBcJ_G0005125	lincRNA gene	Chr10:125951341-125958735 (+)
C3H/HeJ	MGP_C3HHeJ_G0005074	lincRNA gene	Chr10:129398166-129405570 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005276	lincRNA gene	Chr10:135214248-135221642 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004681	lincRNA gene	Chr10:119548444-119555820 (+)
CAST/EiJ	MGP_CASTEiJ_G0005022	lincRNA gene	Chr10:130052245-130059642 (+)
CBA/J	MGP_CBAJ_G0005065	lincRNA gene	Chr10:140655227-140662631 (+)
DBA/2J	MGP_DBA2J_G0005082	lincRNA gene	Chr10:124633350-124640742 (+)
FVB/NJ	MGP_FVBNJ_G0005106	lincRNA gene	Chr10:123573019-123580740 (+)
LP/J	MGP_LPJ_G0005163	lincRNA gene	Chr10:131349831-131357224 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005089	lincRNA gene	Chr10:143367616-143375011 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005281	lincRNA gene	Chr10:129317446-129324853 (+)
PWK/PhJ	MGP_PWKPhJ_G0004972	lincRNA gene	Chr10:124829586-124836983 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004898	lincRNA gene	Chr10:128351925-128359291 (+)
WSB/EiJ	MGP_WSBEiJ_G0005069	lincRNA gene	Chr10:129542631-129550025 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	100038591	NCBI Gene Model \| MGI Sequence Detail	7395	C57BL/6J	± kb
transcript	NR_045715	RefSeq \| MGI Sequence Detail	2552	C57BL/6
polypeptide	Q3TNJ6	UniProt \| EBI \| MGI Sequence Detail	78	Not Applicable

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Summaries

All 14

Phenotypes 2
Earliest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for F420014N23Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96170	Chr10:127031109-127031167 (+)	20 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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