Gm10643 Gene Detail

Summary

• Symbol
  Gm10643
• Name
  predicted gene 10643

• Feature Type
  protein coding gene
• IDs
  MGI:3642507
  NCBI Gene: 100038416
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:84790190-84791766 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 40.28 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642507	protein coding gene	Chr8:84790190-84791766 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0033851	protein coding gene	Chr8:84934833-84936411 (-)
A/J	MGP_AJ_G0033834	protein coding gene	Chr8:81607812-81609390 (-)
AKR/J	MGP_AKRJ_G0033760	protein coding gene	Chr8:84020317-84021895 (-)
BALB/cJ	MGP_BALBcJ_G0033827	protein coding gene	Chr8:81713867-81715445 (-)
C3H/HeJ	MGP_C3HHeJ_G0033537	protein coding gene	Chr8:84624592-84626170 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0034347	protein coding gene	Chr8:88194111-88195687 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0031289	protein coding gene	Chr8:75403627-75405207 (-)
CAST/EiJ	MGP_CASTEiJ_G0032867	protein coding gene	Chr8:84048017-84049596 (-)
CBA/J	MGP_CBAJ_G0033513	protein coding gene	Chr8:91308146-91309724 (-)
DBA/2J	MGP_DBA2J_G0033667	protein coding gene	Chr8:81242375-81243953 (-)
FVB/NJ	MGP_FVBNJ_G0033614	protein coding gene	Chr8:80164130-80165706 (-)
LP/J	MGP_LPJ_G0033758	protein coding gene	Chr8:85047075-85048653 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0033656	protein coding gene	Chr8:93806613-93808189 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034364	protein coding gene	Chr8:83994300-83995876 (-)
PWK/PhJ	MGP_PWKPhJ_G0032571	protein coding gene	Chr8:80468400-80469976 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0032407	protein coding gene	Chr8:82805540-82807114 (-)
WSB/EiJ	MGP_WSBEiJ_G0032980	protein coding gene	Chr8:84409118-84410694 (-)

Homology

• Gene Tree
  Gm10643
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10643
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000074215 (Evidence)
• NCBI Gene
  100038416

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074215	Ensembl Gene Model | MGI Sequence Detail	1577	C57BL/6J
transcript	ENSMUST00000098592	Ensembl | MGI Sequence Detail	1577	Not Applicable
polypeptide	ENSMUSP00000096191	Ensembl | MGI Sequence Detail	111	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 10

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;