Gm10655 Gene Detail

Summary

• Symbol
  Gm10655
• Name
  predicted gene 10655

• Feature Type
  lncRNA gene
• IDs
  MGI:3642575
  NCBI Gene: 100038496
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:61278079-61279475 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 33.27 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642575	lncRNA gene	Chr9:61278079-61279475 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007445	lincRNA gene	Chr9:60830982-60832378 (-)
A/J	MGP_AJ_G0007440	lincRNA gene	Chr9:58856936-58858332 (-)
AKR/J	MGP_AKRJ_G0007413	lincRNA gene	Chr9:60219555-60220951 (-)
BALB/cJ	MGP_BALBcJ_G0007418	lincRNA gene	Chr9:58575492-58576888 (-)
C3H/HeJ	MGP_C3HHeJ_G0007362	lincRNA gene	Chr9:60708496-60709892 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007589	lincRNA gene	Chr9:62477912-62479308 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006778	lincRNA gene	Chr9:58550536-58551928 (-)
CAST/EiJ	MGP_CASTEiJ_G0007266	lincRNA gene	Chr9:60819518-60820911 (-)
CBA/J	MGP_CBAJ_G0007344	lincRNA gene	Chr9:64635564-64636960 (-)
DBA/2J	MGP_DBA2J_G0007368	lincRNA gene	Chr9:58657240-58658636 (-)
FVB/NJ	MGP_FVBNJ_G0007386	lincRNA gene	Chr9:57938529-57939925 (-)
LP/J	MGP_LPJ_G0007450	lincRNA gene	Chr9:61124685-61126081 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007366	lincRNA gene	Chr9:66099916-66101312 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007593	lincRNA gene	Chr9:60261402-60262798 (-)
PWK/PhJ	MGP_PWKPhJ_G0007207	lincRNA gene	Chr9:58753678-58755074 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007112	lincRNA gene	Chr9:60542433-60543827 (-)
WSB/EiJ	MGP_WSBEiJ_G0007326	lincRNA gene	Chr9:60179096-60180492 (-)

Homology

• Gene Tree
  Gm10655
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000074256 (Evidence)
• NCBI Gene
  100038496

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000074256	Ensembl Gene Model | MGI Sequence Detail	1397	C57BL/6J
transcript	ENSMUST00000098658	Ensembl | MGI Sequence Detail	1397	Not Applicable
polypeptide	Q3U1V0	UniProt | EBI | MGI Sequence Detail	134	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 8
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm10655:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr90006	Chr9:61279469-61279493 (-)	-6 bp