Rpl19-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl19-ps1
• Name
  ribosomal protein L19, pseudogene 1
• Synonyms
  ENSMUSG00000064281, Gm15424

• Feature Type
  pseudogene
• IDs
  MGI:3642668
  NCBI Gene: 100039695
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:84989835-84990425 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 43.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642668	pseudogene	Chr1:84989807-84990508 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014274	pseudogene	ChrX:680338-680847 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0014213	pseudogene	ChrX:697061-697570 (+)
BALB/cJ	MGP_BALBcJ_G0014238	pseudogene	ChrX:687071-687580 (+)
C3H/HeJ	MGP_C3HHeJ_G0014067	pseudogene	ChrX:687773-688282 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011415	pseudogene	Chr15:5192011-5192551 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012502	pseudogene	ChrX:265806-266393 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0014052	pseudogene	ChrX:783604-784113 (+)
DBA/2J	MGP_DBA2J_G0014136	pseudogene	ChrX:703167-703672 (+)
FVB/NJ	MGP_FVBNJ_G0014132	pseudogene	ChrX:668100-668609 (+)
LP/J	MGP_LPJ_G0014227	pseudogene	ChrX:685421-685930 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014170	pseudogene	ChrX:727565-728074 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014662	pseudogene	ChrX:654930-655439 (+)
PWK/PhJ	MGP_PWKPhJ_G0013534	pseudogene	ChrX:643447-643955 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009588	pseudogene	Chr1:50020560-50021143 (+)
WSB/EiJ	MGP_WSBEiJ_G0013782	pseudogene	ChrX:690100-690945 (+)

Homology

• Gene Tree
  Rpl19-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Rpl19-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000064281 (Evidence)
• NCBI Gene
  100039695

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000064281	Ensembl Gene Model | MGI Sequence Detail	591	C57BL/6J
transcript	ENSMUST00000121059	Ensembl | MGI Sequence Detail	591	Not Applicable

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Rpl19-ps1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7657	Chr1:84989799-84989806 (+)	-32 bp