Anxa11os Gene Detail

Summary

• Symbol
  Anxa11os
• Name
  annexin A11, opposite strand
• Synonyms
  Gm9872

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3642737
  NCBI Gene: 105245705
• Alliance
  gene page
• Transcription Start Sites
  5 TSS

Location &
Maps

• Sequence Map
  Chr14:25857201-25870690 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  529 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642737	antisense lncRNA gene	Chr14:25857201-25870690 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003229	antisense lncRNA gene	Chr14:18799825-18813656 (-)
A/J	MGP_AJ_G0003205	antisense lncRNA gene	Chr14:18331841-18346394 (-)
AKR/J	MGP_AKRJ_G0003188	antisense lncRNA gene	Chr14:18974974-18988532 (-)
BALB/cJ	MGP_BALBcJ_G0003192	antisense lncRNA gene	Chr14:18431445-18444950 (-)
C3H/HeJ	MGP_C3HHeJ_G0003148	antisense lncRNA gene	Chr14:18901377-18914894 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003335	antisense lncRNA gene	Chr14:19380166-19393643 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002861	antisense lncRNA gene	Chr14:18533567-18546881 (-)
CAST/EiJ	MGP_CASTEiJ_G0003114	antisense lncRNA gene	Chr14:18771446-18785002 (-)
CBA/J	MGP_CBAJ_G0003145	antisense lncRNA gene	Chr14:20320794-20334311 (-)
DBA/2J	MGP_DBA2J_G0003150	antisense lncRNA gene	Chr14:18133324-18146809 (-)
FVB/NJ	MGP_FVBNJ_G0003168	antisense lncRNA gene	Chr14:18010994-18024503 (-)
LP/J	MGP_LPJ_G0003226	antisense lncRNA gene	Chr14:19071916-19085419 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003159	antisense lncRNA gene	Chr14:20010753-20024278 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003336	antisense lncRNA gene	Chr14:18784707-18799726 (-)
PWK/PhJ	MGP_PWKPhJ_G0003072	antisense lncRNA gene	Chr14:17758484-17772535 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003018	antisense lncRNA gene	Chr14:18596512-18611504 (-)
WSB/EiJ	MGP_WSBEiJ_G0003148	antisense lncRNA gene	Chr14:18769358-18782932 (-)

Homology

• Gene Tree
  Anxa11os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  8
• Gene trapped
  8
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000098609 (Evidence)
• NCBI Gene
  105245705

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098609	Ensembl Gene Model | MGI Sequence Detail	13490	C57BL/6J
transcript	ENSMUST00000184083	Ensembl | MGI Sequence Detail	2479	Not Applicable
polypeptide	Q8CES5	UniProt | EBI | MGI Sequence Detail	114	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;

TSS for Anxa11os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr127777	Chr14:25862296-25862314 (-)	8,385 bp
Tssr127776	Chr14:25858583-25858590 (-)	12,103 bp
Tssr4345	Chr14:25857795-25857805 (-)	12,890 bp
Tssr127775	Chr14:25857629-25857660 (-)	13,045 bp
Tssr127774	Chr14:25857377-25857415 (-)	13,294 bp