Gm10484 Gene Detail

Summary

• Symbol
  Gm10484
• Name
  predicted gene 10484

• Feature Type
  lncRNA gene
• IDs
  MGI:3642756
  NCBI Gene: 100038503
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:5220394-5225152 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  278 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642756	lncRNA gene	Chr5:5220394-5225152 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037024	sense intronic lncRNA gene	Chr5:2056551-2062181 (-)
A/J	MGP_AJ_G0037012	sense intronic lncRNA gene	Chr5:1968191-1973173 (-)
AKR/J	MGP_AKRJ_G0036960	sense intronic lncRNA gene	Chr5:1992838-1997596 (-)
BALB/cJ	MGP_BALBcJ_G0037003	sense intronic lncRNA gene	Chr5:2170429-2175757 (-)
C3H/HeJ	MGP_C3HHeJ_G0036690	sense intronic lncRNA gene	Chr5:2189226-2195415 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037516	sense intronic lncRNA gene	Chr5:2433931-2438689 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034567	sense intronic lncRNA gene	Chr5:2073325-2077659 (-)
CAST/EiJ	MGP_CASTEiJ_G0035878	sense intronic lncRNA gene	Chr5:2152832-2158686 (-)
CBA/J	MGP_CBAJ_G0036665	sense intronic lncRNA gene	Chr5:2398017-2406091 (-)
DBA/2J	MGP_DBA2J_G0036840	sense intronic lncRNA gene	Chr5:2107289-2117138 (-)
FVB/NJ	MGP_FVBNJ_G0036790	sense intronic lncRNA gene	Chr5:1973273-1978950 (-)
LP/J	MGP_LPJ_G0036887	sense intronic lncRNA gene	Chr5:2145195-2152918 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036797	sense intronic lncRNA gene	Chr5:2279348-2284118 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037633	sense intronic lncRNA gene	Chr5:2074193-2078951 (-)
PWK/PhJ	MGP_PWKPhJ_G0035570	sense intronic lncRNA gene	Chr5:2039376-2044250 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035379	sense intronic lncRNA gene	Chr5:2345469-2349970 (-)
WSB/EiJ	MGP_WSBEiJ_G0036078	sense intronic lncRNA gene	Chr5:2081285-2086162 (-)

Homology

• Gene Tree
  Gm10484
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000105864 (Evidence)
• NCBI Gene
  100038503

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105864	Ensembl Gene Model | MGI Sequence Detail	4759	C57BL/6J
transcript	ENSMUST00000196372	Ensembl | MGI Sequence Detail	4759	Not Applicable
polypeptide	Q3UQ20	UniProt | EBI | MGI Sequence Detail	208	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;