Gm10369 Gene Detail

Summary

• Symbol
  Gm10369
• Name
  predicted gene 10369

• Feature Type
  lncRNA gene
• IDs
  MGI:3642774
  NCBI Gene: 100038504
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr5:134704972-134708840 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 74.74 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642774	lncRNA gene	Chr5:134704972-134710639 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004195	antisense lncRNA gene	Chr5:139110949-139114604 (+)
A/J	MGP_AJ_G0004174	antisense lncRNA gene	Chr5:133198535-133202199 (+)
AKR/J	MGP_AKRJ_G0004155	antisense lncRNA gene	Chr5:137515197-137518861 (+)
BALB/cJ	MGP_BALBcJ_G0004160	antisense lncRNA gene	Chr5:134552395-134556050 (+)
C3H/HeJ	MGP_C3HHeJ_G0004108	antisense lncRNA gene	Chr5:138069942-138073597 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004308	antisense lncRNA gene	Chr5:144348214-144351869 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003785	antisense lncRNA gene	Chr5:127484683-127488382 (+)
CAST/EiJ	MGP_CASTEiJ_G0004070	antisense lncRNA gene	Chr5:137496974-137500629 (+)
CBA/J	MGP_CBAJ_G0004102	antisense lncRNA gene	Chr5:149978553-149982208 (+)
DBA/2J	MGP_DBA2J_G0004118	antisense lncRNA gene	Chr5:133091736-133095391 (+)
FVB/NJ	MGP_FVBNJ_G0004134	antisense lncRNA gene	Chr5:132223247-132226911 (+)
LP/J	MGP_LPJ_G0004196	antisense lncRNA gene	Chr5:139581755-139585410 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004124	antisense lncRNA gene	Chr5:153023032-153026687 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004306	antisense lncRNA gene	Chr5:137248239-137251894 (+)
PWK/PhJ	MGP_PWKPhJ_G0004024	antisense lncRNA gene	Chr5:132127830-132131534 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003967	antisense lncRNA gene	Chr5:134827535-134831169 (+)
WSB/EiJ	MGP_WSBEiJ_G0004106	antisense lncRNA gene	Chr5:138000871-138004528 (+)

Homology

• Gene Tree
  Gm10369
  

Human Diseases

• References
  2 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  3
• Genomic Mutations
  3 involving Gm10369
• Find Mice (IMSR)
  4 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000072573 (Evidence)
• NCBI Gene
  100038504

Representative Sequences			Length	Strain/Species
genomic	100038504	NCBI Gene Model | MGI Sequence Detail	3869	C57BL/6J
transcript	NR_166474	RefSeq | MGI Sequence Detail	1361	C57BL/6
polypeptide	Q3UQI0	UniProt | EBI | MGI Sequence Detail	159	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 20

  Diseases 2

  Phenotypes 11
• Earliest
  J:182796 Li HH, et al., Induced chromosome deletions cause hypersociability and other features of Williams-Beuren syndrome in mice. EMBO Mol Med. 2009 Apr;1(1):50-65
• Latest
  J:337436 Abdalla N, et al., Dysfunctional Mitochondria in the Cardiac Fibers of a Williams-Beuren Syndrome Mouse Model. Int J Mol Sci. 2023 Jun 13;24(12)

TSS for Gm10369:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr49098	Chr5:134705398-134705417 (+)	436 bp
Tssr49099	Chr5:134705543-134705567 (+)	583 bp