Gm10263 Pseudogene Detail

Summary

• Symbol
  Gm10263
• Name
  predicted gene 10263

• Feature Type
  pseudogene
• IDs
  MGI:3642825
  NCBI Gene: 100042864
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:73465963-73466262 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 39.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642825	pseudogene	Chr13:73465944-73466264 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0020742	protein coding gene	Chr13:73746776-73748745 (+)
A/J	MGP_AJ_G0020698	protein coding gene	Chr13:71134832-71135119 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0020695	protein coding gene	Chr13:71626379-71626678 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0021132	protein coding gene	Chr13:76210325-76210595 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0027014	protein coding gene	Chr3:127563135-127563434 (+)
CBA/J	MGP_CBAJ_G0020448	protein coding gene	Chr13:79070613-79070912 (+)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0020646	protein coding gene	Chr13:74011701-74011966 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0021171	protein coding gene	Chr13:72677119-72677418 (+)
PWK/PhJ	MGP_PWKPhJ_G0024264	protein coding gene	Chr2:1890292-1890591 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0027470	protein coding gene	Chr4:123383084-123383379 (-)
WSB/EiJ	MGP_WSBEiJ_G0020064	protein coding gene	Chr13:73228041-73228340 (+)

Homology

• Gene Tree
  Gm10263
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10263
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000066407 (Evidence)
• NCBI Gene
  100042864

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066407	Ensembl Gene Model | MGI Sequence Detail	300	C57BL/6J
transcript	ENSMUST00000085163	Ensembl | MGI Sequence Detail	300	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm10263:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120314	Chr13:73465933-73465949 (+)	-22 bp