9230104M06Rik Gene Detail

Summary

• Symbol
  9230104M06Rik
• Name
  RIKEN cDNA 9230104M06 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3642845
  NCBI Gene: 108168035
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:112963584-112965546 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642845	lncRNA gene	Chr12:112963584-112968101 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0020168	protein coding gene	Chr12:115481775-115485402 (+)
A/J	MGP_AJ_G0020124	protein coding gene	Chr12:111018107-111020054 (+)
AKR/J	MGP_AKRJ_G0020099	protein coding gene	Chr12:114243337-114245290 (+)
BALB/cJ	MGP_BALBcJ_G0020109	protein coding gene	Chr12:111481951-111484748 (+)
C3H/HeJ	MGP_C3HHeJ_G0019911	protein coding gene	Chr12:114756259-114758212 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0020554	protein coding gene	Chr12:119035067-119037029 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018168	protein coding gene	Chr12:107454186-107456185 (+)
CAST/EiJ	MGP_CASTEiJ_G0019451	protein coding gene	Chr12:109601990-109603954 (+)
CBA/J	MGP_CBAJ_G0019878	protein coding gene	Chr12:123592271-123594224 (+)
DBA/2J	MGP_DBA2J_G0019995	protein coding gene	Chr12:110516214-110519841 (+)
FVB/NJ	MGP_FVBNJ_G0019980	protein coding gene	Chr12:109349946-109351899 (+)
LP/J	MGP_LPJ_G0020069	protein coding gene	Chr12:115307593-115311220 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0020018	protein coding gene	Chr12:126686333-126689130 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0020583	protein coding gene	Chr12:113757960-113759907 (+)
PWK/PhJ	MGP_PWKPhJ_G0019213	protein coding gene	Chr12:105174496-105176453 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0019017	protein coding gene	Chr12:107932799-107934759 (+)
WSB/EiJ	MGP_WSBEiJ_G0019511	protein coding gene	Chr12:114669685-114671632 (+)

Homology

• Gene Tree
  9230104M06Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000097100 (Evidence)
• NCBI Gene
  108168035

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097100	Ensembl Gene Model | MGI Sequence Detail	1963	C57BL/6J
transcript	ENSMUST00000180971	Ensembl | MGI Sequence Detail	1963	Not Applicable
polypeptide	Q8BM93	UniProt | EBI | MGI Sequence Detail	270	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 9
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;