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Gm9970 Gene Detail
Summary
  • Symbol
    Gm9970
  • Name
    predicted gene 9970
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3642876
    NCBI Gene: 621407
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:31397810-31398576 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 17.27 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642876
 lncRNA gene Chr5:31397810-31398576 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029419
 protein coding gene Chr5:29233210-29233767 (-)
A/J MGP_AJ_G0029385
 protein coding gene Chr5:28271568-28272125 (-)
AKR/J MGP_AKRJ_G0029335
 protein coding gene Chr5:29422209-29422766 (-)
BALB/cJ MGP_BALBcJ_G0029396
 protein coding gene Chr5:28786370-28786927 (-)
C3H/HeJ MGP_C3HHeJ_G0029117
 protein coding gene Chr5:29443389-29443946 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029849
 protein coding gene Chr5:31045665-31046222 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027087
 protein coding gene Chr5:25737026-25737584 (-)
CAST/EiJ MGP_CASTEiJ_G0028527
 protein coding gene Chr5:28525626-28526183 (-)
CBA/J MGP_CBAJ_G0029085
 protein coding gene Chr5:31618152-31618709 (-)
DBA/2J MGP_DBA2J_G0029234
 protein coding gene Chr5:28448336-28448893 (-)
FVB/NJ MGP_FVBNJ_G0029192
 protein coding gene Chr5:27867424-27867981 (-)
LP/J MGP_LPJ_G0029319
 protein coding gene Chr5:29686825-29687382 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029221
 protein coding gene Chr5:32482016-32482573 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029883
 protein coding gene Chr5:28937837-28938394 (-)
PWK/PhJ MGP_PWKPhJ_G0028252
 protein coding gene Chr5:27572193-27572835 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028083
 protein coding gene Chr5:28331877-28332434 (-)
WSB/EiJ MGP_WSBEiJ_G0028608
 protein coding gene Chr5:29001749-29002306 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    21 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055424 Ensembl Gene Model | MGI Sequence Detail 767 C57BL/6J ±  kb
transcript ENSMUST00000238448 Ensembl | MGI Sequence Detail 767 Not Applicable  
polypeptide Q8C5Y9 UniProt | EBI | MGI Sequence Detail 185 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 28
    Diseases 1
    Phenotypes 21
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory