Gm4962 Pseudogene Detail

Summary

• Symbol
  Gm4962
• Name
  predicted gene 4962

• Feature Type
  pseudogene
• IDs
  MGI:3643111
  NCBI Gene: 242987
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:50837124-50840033 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 26.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  331 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643111	pseudogene	Chr5:50837058-50840034 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0039722	pseudogene	Chr5:47841047-47844420 (+)
AKR/J	MGP_AKRJ_G0039646	pseudogene	Chr5:49475483-49478486 (+)
BALB/cJ	MGP_BALBcJ_G0039690	pseudogene	Chr5:48312849-48315901 (+)
C3H/HeJ	MGP_C3HHeJ_G0039353	pseudogene	Chr5:49635500-49638341 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040251	pseudogene	Chr5:51699844-51703694 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036881	pseudogene	Chr5:44678028-44681119 (+)
CAST/EiJ	MGP_CASTEiJ_G0038472	pseudogene	Chr5:48591970-48597010 (+)
CBA/J	MGP_CBAJ_G0039324	pseudogene	Chr5:53240269-53244051 (+)
DBA/2J	MGP_DBA2J_G0039517	pseudogene	Chr5:47906827-47909923 (+)
FVB/NJ	MGP_FVBNJ_G0039476	pseudogene	Chr5:47239604-47244213 (+)
LP/J	MGP_LPJ_G0039556	pseudogene	Chr5:50046962-50051075 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039478	pseudogene	Chr5:54324748-54327687 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040352	pseudogene	Chr5:48992893-48996337 (+)
PWK/PhJ	MGP_PWKPhJ_G0038147	pseudogene	Chr5:46964077-46967101 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037895	pseudogene	Chr5:48356716-48359789 (+)
WSB/EiJ	MGP_WSBEiJ_G0038706	pseudogene	Chr5:49013572-49016365 (+)

Homology

• Gene Tree
  Gm4962
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm4962
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000106038 (Evidence)
• NCBI Gene
  242987

Representative Sequences			Length	Strain/Species
genomic	242987	NCBI Gene Model | MGI Sequence Detail	2910	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17