Gm8185 Pseudogene Detail

Summary

• Symbol
  Gm8185
• Name
  predicted gene 8185

• Feature Type
  pseudogene
• IDs
  MGI:3643116
  NCBI Gene: 666607
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:77083282-77083950 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 40.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643116	pseudogene	Chr13:77083207-77084009 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011043	pseudogene	Chr13:77502072-77502740 (+)
A/J	MGP_AJ_G0011044	pseudogene	Chr13:74865120-74865788 (+)
AKR/J	MGP_AKRJ_G0010999	pseudogene	Chr13:77133733-77134401 (+)
BALB/cJ	MGP_BALBcJ_G0011019	pseudogene	Chr13:75348397-75349065 (+)
C3H/HeJ	MGP_C3HHeJ_G0010918	pseudogene	Chr13:76836882-76837550 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011298	pseudogene	Chr13:80091148-80091816 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009892	pseudogene	Chr13:71613736-71614404 (+)
CAST/EiJ	MGP_CASTEiJ_G0010739	pseudogene	Chr13:75923605-75924273 (+)
CBA/J	MGP_CBAJ_G0010890	pseudogene	Chr13:83119531-83120199 (+)
DBA/2J	MGP_DBA2J_G0010935	pseudogene	Chr13:74562083-74562751 (+)
FVB/NJ	MGP_FVBNJ_G0010946	pseudogene	Chr13:73625461-73626129 (+)
LP/J	MGP_LPJ_G0011024	pseudogene	Chr13:77766277-77766945 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010931	pseudogene	Chr13:81558263-81558931 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011280	pseudogene	Chr13:76438910-76439578 (+)
PWK/PhJ	MGP_PWKPhJ_G0010616	pseudogene	Chr13:73470979-73471648 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010438	pseudogene	Chr13:72832829-72833497 (+)
WSB/EiJ	MGP_WSBEiJ_G0010789	pseudogene	Chr13:76952518-76953186 (+)

Homology

• Gene Tree
  Gm8185
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8185
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000090119 (Evidence)
• NCBI Gene
  666607

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090119	Ensembl Gene Model | MGI Sequence Detail	669	C57BL/6J
transcript	ENSMUST00000160999	Ensembl | MGI Sequence Detail	669	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm8185:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120441	Chr13:77083214-77083229 (+)	-60 bp