Gm10364 Pseudogene Detail

Summary

• Symbol
  Gm10364
• Name
  predicted pseudogene 10364
• Synonyms
  EG545052

• Feature Type
  pseudogene
• IDs
  MGI:3643153
  NCBI Gene: 100151693
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:55279229-55280229 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 28.04 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643153	pseudogene	Chr14:55275919-55280433 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039668	pseudogene	Chr14:49037352-49041784 (+)
A/J	MGP_AJ_G0039665	pseudogene	Chr14:48058508-48062940 (+)
AKR/J	MGP_AKRJ_G0039591	pseudogene	Chr14:49805618-49810050 (+)
BALB/cJ	MGP_BALBcJ_G0039639	pseudogene	Chr14:48037072-48041504 (+)
C3H/HeJ	MGP_C3HHeJ_G0039301	pseudogene	Chr14:49497489-49501921 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040193	pseudogene	Chr14:51512318-51530258 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036835	pseudogene	Chr14:46467499-46468647 (+)
CAST/EiJ	MGP_CASTEiJ_G0038421	pseudogene	Chr14:45741180-45745662 (+)
CBA/J	MGP_CBAJ_G0039270	pseudogene	Chr14:53079118-53083550 (+)
DBA/2J	MGP_DBA2J_G0039462	pseudogene	Chr14:47799580-47804000 (+)
FVB/NJ	MGP_FVBNJ_G0039419	pseudogene	Chr14:47266404-47270824 (+)
LP/J	MGP_LPJ_G0039505	pseudogene	Chr14:50090174-50094606 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039423	pseudogene	Chr14:52446019-52450439 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040298	pseudogene	Chr14:48992865-48997297 (+)
PWK/PhJ	MGP_PWKPhJ_G0038095	pseudogene	Chr14:44338280-44342832 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037846	pseudogene	Chr14:44976331-44980777 (+)
WSB/EiJ	MGP_WSBEiJ_G0038653	pseudogene	Chr14:49287814-49292249 (+)

Homology

• Gene Tree
  Gm10364
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  9
• Chemically induced (other)
  1
• Gene trapped
  6
• Targeted
  2
• Genomic Mutations
  1 involving Gm10364
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000072492 (Evidence)
• NCBI Gene
  100151693

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000072492	Ensembl Gene Model | MGI Sequence Detail	1001	C57BL/6J
transcript	ENSMUST00000153034	Ensembl | MGI Sequence Detail	1001	Not Applicable
polypeptide	Q499D1	UniProt | EBI | MGI Sequence Detail	118	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
  IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
  IPR036291 NAD(P)-binding domain superfamily

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 6
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42