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Gm5916 Gene Detail
Summary
  • Symbol
    Gm5916
  • Name
    predicted gene 5916
  • Feature Type
    protein coding gene
  • IDs
    MGI:3643162
    NCBI Gene: 546123
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr9:36031116-36040075 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 20.63 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    317 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643162
 protein coding gene Chr9:36030660-36040141 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0034452
 protein coding gene Chr9:33517084-33822702 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0034229
 protein coding gene Chr9:33857028-34258679 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035038
 protein coding gene Chr9:35110115-35116100 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031968
 protein coding gene Chr9:31422200-31428063 (-)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0034360
 protein coding gene Chr9:32808895-33143732 (-)
FVB/NJ MGP_FVBNJ_G0034302
 protein coding gene Chr9:32452548-32467883 (-)
LP/J MGP_LPJ_G0034446
 protein coding gene Chr9:34252149-34260051 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034348
 protein coding gene Chr9:37955056-37962551 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035059
 protein coding gene Chr9:33813076-33827198 (-)
PWK/PhJ MGP_PWKPhJ_G0033257
 protein coding gene Chr9:32775253-33075056 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033092
 protein coding gene Chr9:33777223-33782319 (-)
WSB/EiJ MGP_WSBEiJ_G0033667
 protein coding gene Chr9:33557493-33563312 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091411 Ensembl Gene Model | MGI Sequence Detail 8960 C57BL/6J ±  kb
transcript ENSMUST00000168452 Ensembl | MGI Sequence Detail 445 Not Applicable  
polypeptide ENSMUSP00000125855 Ensembl | MGI Sequence Detail 102 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:138601 Levitin F, et al., PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR proteins that are expressed in reproductive and neuron-rich tissues and possess neuromodulatory activity. J Biol Chem. 2008 Jun 13;283(24):16928-39
  • Latest
    J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory