Gm8601 Pseudogene Detail

Summary

• Symbol
  Gm8601
• Name
  predicted gene 8601

• Feature Type
  pseudogene
• IDs
  MGI:3643183
  NCBI Gene: 667380
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:96312341-96313249 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 49.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643183	pseudogene	Chr10:96312327-96313395 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010541	pseudogene	Chr10:98128730-98129638 (+)
A/J	MGP_AJ_G0010535	pseudogene	Chr10:94654191-94655099 (+)
AKR/J	MGP_AKRJ_G0010495	pseudogene	Chr10:97342233-97343141 (+)
BALB/cJ	MGP_BALBcJ_G0010509	pseudogene	Chr10:94923366-94924274 (+)
C3H/HeJ	MGP_C3HHeJ_G0010432	pseudogene	Chr10:97353844-97354752 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010776	pseudogene	Chr10:101554279-101555187 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009446	pseudogene	Chr10:90175955-90176856 (+)
CAST/EiJ	MGP_CASTEiJ_G0010256	pseudogene	Chr10:97389049-97389957 (+)
CBA/J	MGP_CBAJ_G0010402	pseudogene	Chr10:105558451-105559359 (+)
DBA/2J	MGP_DBA2J_G0010433	pseudogene	Chr10:93713121-93714029 (+)
FVB/NJ	MGP_FVBNJ_G0010451	pseudogene	Chr10:92979453-92980361 (+)
LP/J	MGP_LPJ_G0010523	pseudogene	Chr10:98735294-98736202 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010425	pseudogene	Chr10:106701479-106702387 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010752	pseudogene	Chr10:97269022-97269930 (+)
PWK/PhJ	MGP_PWKPhJ_G0010156	pseudogene	Chr10:93864066-93864974 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009968	pseudogene	Chr10:96102287-96103179 (+)
WSB/EiJ	MGP_WSBEiJ_G0010321	pseudogene	Chr10:97249359-97250267 (+)

Homology

• Gene Tree
  Gm8601
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8601
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097939 (Evidence)
• NCBI Gene
  667380

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097939	Ensembl Gene Model | MGI Sequence Detail	909	C57BL/6J
transcript	ENSMUST00000182096	Ensembl | MGI Sequence Detail	909	Not Applicable

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87