Gm7504 Pseudogene Detail

Summary

• Symbol
  Gm7504
• Name
  predicted gene 7504

• Feature Type
  pseudogene
• IDs
  MGI:3643241
  NCBI Gene: 665125
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:38261461-38261884 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 17.71 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643241	pseudogene	Chr6:38261380-38261944 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013411	pseudogene	Chr6:36576699-36577122 (+)
A/J	MGP_AJ_G0013395	pseudogene	Chr6:34988988-34989411 (+)
AKR/J	MGP_AKRJ_G0013358	pseudogene	Chr6:36101080-36101503 (+)
BALB/cJ	MGP_BALBcJ_G0013373	pseudogene	Chr6:35180464-35180887 (+)
C3H/HeJ	MGP_C3HHeJ_G0013224	pseudogene	Chr6:36103706-36104129 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013755	pseudogene	Chr6:37492623-37493046 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009378	pseudogene	Chr1:173873519-173873949 (-)
CAST/EiJ	MGP_CASTEiJ_G0012935	pseudogene	Chr6:36000399-36000822 (+)
CBA/J	MGP_CBAJ_G0013191	pseudogene	Chr6:38932892-38933315 (+)
DBA/2J	MGP_DBA2J_G0013275	pseudogene	Chr6:34809769-34810192 (+)
FVB/NJ	MGP_FVBNJ_G0013272	pseudogene	Chr6:34595746-34596169 (+)
LP/J	MGP_LPJ_G0013344	pseudogene	Chr6:36624953-36625376 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013289	pseudogene	Chr6:41295514-41295937 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013750	pseudogene	Chr6:36034015-36034438 (+)
PWK/PhJ	MGP_PWKPhJ_G0012748	pseudogene	Chr6:34455975-34456934 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012527	pseudogene	Chr6:35754599-35755022 (+)
WSB/EiJ	MGP_WSBEiJ_G0012975	pseudogene	Chr6:35969036-35969459 (+)

Homology

• Gene Tree
  Gm7504
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000107026 (Evidence)
• NCBI Gene
  665125

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107026	Ensembl Gene Model | MGI Sequence Detail	424	C57BL/6J
transcript	ENSMUST00000201449	Ensembl | MGI Sequence Detail	424	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm7504:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr55634	Chr6:38261405-38261407 (+)	-55 bp