Gm6665 Pseudogene Detail

Summary

• Symbol
  Gm6665
• Name
  predicted gene 6665

• Feature Type
  pseudogene
• IDs
  MGI:3643253
  NCBI Gene: 626327
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:31952915-31953572 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 17.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643253	pseudogene	Chr18:31952718-31953572 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0024184	protein coding gene	Chr18:28946904-28947456 (-)
AKR/J	MGP_AKRJ_G0024153	protein coding gene	Chr18:29748910-29749462 (-)
BALB/cJ	MGP_BALBcJ_G0024184	protein coding gene	Chr18:29038802-29039353 (-)
C3H/HeJ	MGP_C3HHeJ_G0023952	protein coding gene	Chr18:29787096-29788123 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0024626	protein coding gene	Chr18:31004403-31005037 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0023427	protein coding gene	Chr18:29677195-29677746 (-)
CBA/J	MGP_CBAJ_G0023920	protein coding gene	Chr18:31970160-31970712 (-)
DBA/2J	MGP_DBA2J_G0024052	protein coding gene	Chr18:28620618-28621170 (-)
FVB/NJ	MGP_FVBNJ_G0024018	protein coding gene	Chr18:28323820-28324372 (-)
LP/J	MGP_LPJ_G0024133	protein coding gene	Chr18:30020096-30020636 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0024046	protein coding gene	Chr18:33318746-33319786 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0024674	protein coding gene	Chr18:29614161-29614713 (-)
PWK/PhJ	MGP_PWKPhJ_G0023170	protein coding gene	Chr18:28774950-28775501 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0022979	protein coding gene	Chr18:29838354-29838905 (-)
WSB/EiJ	MGP_WSBEiJ_G0023490	protein coding gene	Chr18:29512960-29513511 (-)

Homology

• Gene Tree
  Gm6665
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000091561 (Evidence)
• NCBI Gene
  626327

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091561	Ensembl Gene Model | MGI Sequence Detail	658	C57BL/6J
transcript	ENSMUST00000165131	Ensembl | MGI Sequence Detail	658	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;