Gm6092 Pseudogene Detail

Summary

• Symbol
  Gm6092
• Name
  predicted gene 6092

• Feature Type
  pseudogene
• IDs
  MGI:3643525
  NCBI Gene: 619688
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:94254792-94255383 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 41.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643525	pseudogene	ChrX:94253379-94255407 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014631	pseudogene	ChrX:91574634-91576636 (-)
A/J	MGP_AJ_G0014640	pseudogene	ChrX:91771378-91773384 (-)
AKR/J	MGP_AKRJ_G0014563	pseudogene	ChrX:94187763-94189741 (-)
BALB/cJ	MGP_BALBcJ_G0014588	pseudogene	ChrX:90510095-90512087 (-)
C3H/HeJ	MGP_C3HHeJ_G0014425	pseudogene	ChrX:92047154-92049138 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015071	pseudogene	ChrX:94459822-94461828 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012775	pseudogene	ChrX:89875469-89877423 (-)
CAST/EiJ	MGP_CASTEiJ_G0014050	pseudogene	ChrX:76594198-76596149 (-)
CBA/J	MGP_CBAJ_G0014411	pseudogene	ChrX:97227485-97229465 (-)
DBA/2J	MGP_DBA2J_G0014493	pseudogene	ChrX:90952745-90954764 (-)
FVB/NJ	MGP_FVBNJ_G0014480	pseudogene	ChrX:90368489-90370467 (-)
LP/J	MGP_LPJ_G0014591	pseudogene	ChrX:92559057-92561047 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014519	pseudogene	ChrX:101557808-101559894 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015038	pseudogene	ChrX:91281421-91283411 (-)
PWK/PhJ	MGP_PWKPhJ_G0013857	pseudogene	ChrX:74280191-74282138 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013649	pseudogene	ChrX:77392439-77398234 (-)
WSB/EiJ	MGP_WSBEiJ_G0014128	pseudogene	ChrX:90154592-90156560 (-)

Homology

• Gene Tree
  Gm6092
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083789 (Evidence)
• NCBI Gene
  619688

Representative Sequences			Length	Strain/Species
genomic	619688	NCBI Gene Model | MGI Sequence Detail	592	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm6092:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163800	ChrX:94255394-94255408 (-)	-18 bp