Gm8916 Pseudogene Detail

Summary

• Symbol
  Gm8916
• Name
  predicted gene 8916

• Feature Type
  pseudogene
• IDs
  MGI:3643555
  NCBI Gene: 667993
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:90590199-90591147 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 40.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  69 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643555	pseudogene	ChrX:90590120-90591147 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014599	pseudogene	ChrX:87552518-87553468 (-)
A/J	MGP_AJ_G0014611	pseudogene	ChrX:87987049-87987997 (-)
AKR/J	MGP_AKRJ_G0014535	pseudogene	ChrX:90248144-90249092 (-)
BALB/cJ	MGP_BALBcJ_G0014562	pseudogene	ChrX:86689601-86690549 (-)
C3H/HeJ	MGP_C3HHeJ_G0014395	pseudogene	ChrX:88167625-88168573 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015039	pseudogene	ChrX:90257524-90258474 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014019	pseudogene	ChrX:72654836-72655781 (-)
CBA/J	MGP_CBAJ_G0014380	pseudogene	ChrX:92783969-92784919 (-)
DBA/2J	MGP_DBA2J_G0014461	pseudogene	ChrX:86944537-86945487 (-)
FVB/NJ	MGP_FVBNJ_G0014449	pseudogene	ChrX:86375312-86376260 (-)
LP/J	MGP_LPJ_G0014563	pseudogene	ChrX:88620586-88621534 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014493	pseudogene	ChrX:97322512-97323460 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015008	pseudogene	ChrX:87541525-87542473 (-)
PWK/PhJ	MGP_PWKPhJ_G0013829	pseudogene	ChrX:70867967-70868915 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013621	pseudogene	ChrX:73784132-73785083 (-)
WSB/EiJ	MGP_WSBEiJ_G0014099	pseudogene	ChrX:86361623-86362571 (-)

Homology

• Gene Tree
  Gm8916
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000084057 (Evidence)
• NCBI Gene
  667993

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084057	Ensembl Gene Model | MGI Sequence Detail	949	C57BL/6J
transcript	ENSMUST00000119732	Ensembl | MGI Sequence Detail	949	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;