Gm8210 Pseudogene Detail

Summary

• Symbol
  Gm8210
• Name
  predicted pseudogene 8210

• Feature Type
  pseudogene
• IDs
  MGI:3643593
  NCBI Gene: 666642
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:43228316-43228798 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 22.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643593	pseudogene	Chr1:43228212-43228933 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012771	pseudogene	Chr4:95090103-95090547 (-)
A/J	MGP_AJ_G0012757	pseudogene	Chr4:91766385-91767026 (-)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0012737	pseudogene	Chr4:92008177-92008621 (-)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012350	pseudogene	Chr4:92641259-92644995 (-)
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0012637	pseudogene	Chr4:90421237-90421681 (-)
LP/J	MGP_LPJ_G0012707	pseudogene	Chr4:95413794-95414238 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012646	pseudogene	Chr4:107514276-107514720 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013075	pseudogene	Chr4:94256900-94257344 (-)
PWK/PhJ	MGP_PWKPhJ_G0012171	pseudogene	Chr4:89698591-89699085 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011981	pseudogene	Chr4:91653335-91653780 (-)
WSB/EiJ	MGP_WSBEiJ_G0012376	pseudogene	Chr4:94392687-94393131 (-)

Homology

• Gene Tree
  Gm8210
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8210
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000094497 (Evidence)
• NCBI Gene
  666642

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094497	Ensembl Gene Model | MGI Sequence Detail	483	C57BL/6J
transcript	ENSMUST00000178557	Ensembl | MGI Sequence Detail	483	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8210:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr6523	Chr1:43228260-43228275 (+)	-48 bp