Gm8582 Pseudogene Detail

Summary

• Symbol
  Gm8582
• Name
  predicted gene 8582

• Feature Type
  pseudogene
• IDs
  MGI:3643667
  NCBI Gene: 667341
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:3337596-3341905 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 8.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  209 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643667	pseudogene	Chr14:3337405-3341905 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040068	pseudogene	Chr14:11780252-11784550 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0039991	pseudogene	Chr14:11840427-11845629 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0039696	pseudogene	Chr14:11914301-11918609 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040631	pseudogene	Chr14:12231867-12236176 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037166	pseudogene	Chr16:65407108-65411454 (-)
CAST/EiJ	MGP_CASTEiJ_G0038798	pseudogene	Chr14:11705201-11708399 (+)
CBA/J	MGP_CBAJ_G0039663	pseudogene	Chr14:12720836-12725144 (+)
DBA/2J	MGP_DBA2J_G0039857	pseudogene	Chr14:11370395-11374703 (+)
FVB/NJ	MGP_FVBNJ_G0039831	pseudogene	Chr14:11196618-11200927 (+)
LP/J	MGP_LPJ_G0039905	pseudogene	Chr14:11893493-11897797 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039817	pseudogene	Chr14:12702317-12706626 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040727	pseudogene	Chr14:11708623-11712932 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm8582
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  2

• Ensembl
  ENSMUSG00000091929 (Evidence)
• NCBI Gene
  667341

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091929	Ensembl Gene Model | MGI Sequence Detail	4310	C57BL/6J
transcript	ENSMUST00000164061	Ensembl | MGI Sequence Detail	789	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8582:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr124364	Chr14:3341928-3341949 (-)	-34 bp