Gm8682 Pseudogene Detail

Summary

• Symbol
  Gm8682
• Name
  predicted gene 8682

• Feature Type
  pseudogene
• IDs
  MGI:3643679
  NCBI Gene: 667524
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:158819317-158819814 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 73.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643679	pseudogene	ChrX:158819317-158819996 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014978	pseudogene	ChrX:157950062-157950559 (+)
A/J	MGP_AJ_G0014967	pseudogene	ChrX:157232282-157232779 (+)
AKR/J	MGP_AKRJ_G0014909	pseudogene	ChrX:162222499-162222996 (+)
BALB/cJ	MGP_BALBcJ_G0014922	pseudogene	ChrX:155302210-155302706 (+)
C3H/HeJ	MGP_C3HHeJ_G0014760	pseudogene	ChrX:158357659-158358156 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015408	pseudogene	ChrX:162651847-162652344 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013030	pseudogene	ChrX:148492548-148493045 (+)
CAST/EiJ	MGP_CASTEiJ_G0014365	pseudogene	ChrX:137379596-137380092 (+)
CBA/J	MGP_CBAJ_G0014744	pseudogene	ChrX:167288367-167288864 (+)
DBA/2J	MGP_DBA2J_G0014829	pseudogene	ChrX:156206097-156206594 (+)
FVB/NJ	MGP_FVBNJ_G0014812	pseudogene	ChrX:155314660-155315157 (+)
LP/J	MGP_LPJ_G0014930	pseudogene	ChrX:159132403-159132900 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014856	pseudogene	ChrX:175979082-175979578 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015392	pseudogene	ChrX:157504237-157504734 (+)
PWK/PhJ	MGP_PWKPhJ_G0014157	pseudogene	ChrX:134256094-134256590 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013947	pseudogene	ChrX:137806833-137807330 (+)
WSB/EiJ	MGP_WSBEiJ_G0014445	pseudogene	ChrX:155464074-155464571 (+)

Homology

• Gene Tree
  Gm8682
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm8682
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082810 (Evidence)
• NCBI Gene
  667524

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082810	Ensembl Gene Model | MGI Sequence Detail	498	C57BL/6J
transcript	ENSMUST00000121310	Ensembl | MGI Sequence Detail	498	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:46359 Blair HJ, et al., Mouse mutants carrying deletions that remove the genes mutated in Coffin-Lowry syndrome and lactic acidosis. Hum Mol Genet. 1998 Mar;7(3):549-55