Gm15476 Pseudogene Detail

Summary

• Symbol
  Gm15476
• Name
  predicted gene 15476
• Synonyms
  EG632216

• Feature Type
  pseudogene
• IDs
  MGI:3643813
  NCBI Gene: 632216
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:136360726-136361916 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 66.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  266 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643813	pseudogene	Chr6:136360666-136361916 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013749	pseudogene	Chr6:140793712-140794888 (+)
A/J	MGP_AJ_G0013744	pseudogene	Chr6:135217783-135218968 (+)
AKR/J	MGP_AKRJ_G0013699	pseudogene	Chr6:139328723-139329908 (+)
BALB/cJ	MGP_BALBcJ_G0013725	pseudogene	Chr6:135080446-135081631 (+)
C3H/HeJ	MGP_C3HHeJ_G0013555	pseudogene	Chr6:139376247-139377432 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014121	pseudogene	Chr6:144643961-144645151 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012070	pseudogene	Chr6:134379478-134381396 (+)
CAST/EiJ	MGP_CASTEiJ_G0013239	pseudogene	Chr6:138862508-138863701 (+)
CBA/J	MGP_CBAJ_G0013532	pseudogene	Chr6:150008907-150010092 (+)
DBA/2J	MGP_DBA2J_G0013612	pseudogene	Chr6:134076805-134077990 (+)
FVB/NJ	MGP_FVBNJ_G0013606	pseudogene	Chr6:133000549-133001740 (+)
LP/J	MGP_LPJ_G0013694	pseudogene	Chr6:140919855-140921031 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013623	pseudogene	Chr6:153931316-153932501 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014101	pseudogene	Chr6:139103819-139105009 (+)
PWK/PhJ	MGP_PWKPhJ_G0013051	pseudogene	Chr6:132602364-132603558 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012829	pseudogene	Chr6:137331081-137332280 (+)
WSB/EiJ	MGP_WSBEiJ_G0013300	pseudogene	Chr6:139730833-139732018 (+)

Homology

• Gene Tree
  Gm15476
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083916 (Evidence)
• NCBI Gene
  632216

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083916	Ensembl Gene Model | MGI Sequence Detail	1191	C57BL/6J
transcript	ENSMUST00000118247	Ensembl | MGI Sequence Detail	1191	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;