Btf3-ps10 Pseudogene Detail

Summary

• Symbol
  Btf3-ps10
• Name
  basic transcription factor 3, pseudogene 10
• Synonyms
  Gm7834

• Feature Type
  pseudogene
• IDs
  MGI:3643838
  NCBI Gene: 665866
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:50301388-50301824 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 28.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643838	pseudogene	ChrX:50301387-50307019 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014419	pseudogene	ChrX:46384253-46384689 (-)
A/J	MGP_AJ_G0014425	pseudogene	ChrX:46250392-46250828 (-)
AKR/J	MGP_AKRJ_G0014352	pseudogene	ChrX:47523162-47523598 (-)
BALB/cJ	MGP_BALBcJ_G0014378	pseudogene	ChrX:45847923-45848359 (-)
C3H/HeJ	MGP_C3HHeJ_G0014211	pseudogene	ChrX:46646992-46647428 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014836	pseudogene	ChrX:47485660-47486096 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012621	pseudogene	ChrX:43804207-43804658 (-)
CAST/EiJ	MGP_CASTEiJ_G0013852	pseudogene	ChrX:34108516-34108952 (-)
CBA/J	MGP_CBAJ_G0014194	pseudogene	ChrX:48818066-48818502 (-)
DBA/2J	MGP_DBA2J_G0014275	pseudogene	ChrX:46073787-46074223 (-)
FVB/NJ	MGP_FVBNJ_G0014274	pseudogene	ChrX:45775524-45775960 (-)
LP/J	MGP_LPJ_G0014373	pseudogene	ChrX:46721592-46722028 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014308	pseudogene	ChrX:50353027-50353463 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014815	pseudogene	ChrX:46280394-46280830 (-)
PWK/PhJ	MGP_PWKPhJ_G0013665	pseudogene	ChrX:33609657-33610095 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013459	pseudogene	ChrX:34893511-34893961 (-)
WSB/EiJ	MGP_WSBEiJ_G0013918	pseudogene	ChrX:45829566-45830002 (-)

Homology

• Gene Tree
  Btf3-ps10
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000082950 (Evidence)
• NCBI Gene
  665866

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082950	Ensembl Gene Model | MGI Sequence Detail	437	C57BL/6J
transcript	ENSMUST00000117560	Ensembl | MGI Sequence Detail	437	Not Applicable

Other
Accession IDs

MGI:6450949

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;