Gm7091 Pseudogene Detail

Summary

• Symbol
  Gm7091
• Name
  predicted gene 7091

• Feature Type
  pseudogene
• IDs
  MGI:3643894
  NCBI Gene: 632685
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:139722685-139723270 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 61.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643894	pseudogene	ChrX:139722685-139723272 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014867	pseudogene	ChrX:138394040-138394625 (-)
A/J	MGP_AJ_G0014860	pseudogene	ChrX:137768446-137769031 (-)
AKR/J	MGP_AKRJ_G0014802	pseudogene	ChrX:142180243-142181888 (-)
BALB/cJ	MGP_BALBcJ_G0014816	pseudogene	ChrX:136072023-136072608 (-)
C3H/HeJ	MGP_C3HHeJ_G0014652	pseudogene	ChrX:138399738-138400323 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015304	pseudogene	ChrX:142421895-142422480 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012929	pseudogene	ChrX:125852335-125852924 (+)
CAST/EiJ	MGP_CASTEiJ_G0014266	pseudogene	ChrX:119220037-119220622 (-)
CBA/J	MGP_CBAJ_G0014641	pseudogene	ChrX:146819704-146820289 (-)
DBA/2J	MGP_DBA2J_G0014724	pseudogene	ChrX:136897410-136897995 (-)
FVB/NJ	MGP_FVBNJ_G0014707	pseudogene	ChrX:136129076-136129694 (-)
LP/J	MGP_LPJ_G0014823	pseudogene	ChrX:139326446-139327031 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0015285	pseudogene	ChrX:137698835-137699420 (-)
PWK/PhJ	MGP_PWKPhJ_G0014067	pseudogene	ChrX:116111523-116112249 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013838	pseudogene	ChrX:115959981-115960567 (+)
WSB/EiJ	MGP_WSBEiJ_G0014346	pseudogene	ChrX:136016305-136016890 (-)

Homology

• Gene Tree
  Gm7091
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000082165 (Evidence)
• NCBI Gene
  632685

Representative Sequences			Length	Strain/Species
genomic	632685	NCBI Gene Model | MGI Sequence Detail	586	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7091:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr164259	ChrX:139723304-139723324 (-)	-44 bp