Gm8506 Pseudogene Detail

Summary

• Symbol
  Gm8506
• Name
  predicted gene 8506

• Feature Type
  pseudogene
• IDs
  MGI:3643897
  NCBI Gene: 667194
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrY:2895798-2896626 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome Y, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3643897	pseudogene	ChrY:2895650-2896822 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013118	pseudogene	Chr5:63766399-63767217 (-)
A/J	no annotation
AKR/J	MGP_AKRJ_G0013068	pseudogene	Chr5:63308267-63309079 (-)
BALB/cJ	MGP_BALBcJ_G0013082	pseudogene	Chr5:62069468-62070280 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0013442	pseudogene	Chr5:66409107-66409925 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011687	pseudogene	Chr5:91275428-91276182 (+)
CAST/EiJ	MGP_CASTEiJ_G0012664	pseudogene	Chr5:62744800-62745619 (-)
CBA/J	MGP_CBAJ_G0012901	pseudogene	Chr5:68535949-68536761 (-)
DBA/2J	MGP_DBA2J_G0012979	pseudogene	Chr5:61419121-61419938 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013053	pseudogene	Chr5:64226393-64227211 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013000	pseudogene	Chr5:71458276-71459088 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013444	pseudogene	Chr5:63005705-63006517 (-)
PWK/PhJ	MGP_PWKPhJ_G0012483	pseudogene	Chr5:60390130-60390933 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012282	pseudogene	Chr5:62356466-62357349 (-)
WSB/EiJ	MGP_WSBEiJ_G0012701	pseudogene	Chr5:63215213-63216039 (-)

Homology

• Gene Tree
  Gm8506
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000099405 (Evidence)
• NCBI Gene
  667194

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099405	Ensembl Gene Model | MGI Sequence Detail	829	C57BL/6J
transcript	ENSMUST00000186661	Ensembl | MGI Sequence Detail	829	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;