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Igkv12-40 Pseudogene Detail
Summary
  • Symbol
    Igkv12-40
  • Name
    immunoglobulin kappa chain variable 12-40
  • Synonyms
    Gm5722
  • Feature Type
    pseudogenic gene segment
  • IDs
    MGI:3643951
    NCBI Gene: 435904
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:69856334-69856803 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    175 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3643951
 pseudogenic gene segment Chr6:69856334-69856803 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000282
 pseudogenic gene segment Chr6:70226681-70227150 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0000373
 pseudogenic gene segment Chr6:71991680-71992149 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0000244
 pseudogenic gene segment Chr6:66310997-66311466 (-)
LP/J MGP_LPJ_G0000292
 pseudogenic gene segment Chr6:70081076-70081545 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0000253
 pseudogenic gene segment Chr6:78498893-78499361 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0000349
 pseudogenic gene segment Chr6:69335047-69335516 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    11
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 435904 NCBI Gene Model | MGI Sequence Detail 470 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:164271 Arnhold J, et al., Human myeloperoxidase in innate and acquired immunity. Arch Biochem Biophys. 2010 Aug 1;500(1):92-106
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory