Gm7837 Pseudogene Detail

Summary

• Symbol
  Gm7837
• Name
  predicted gene 7837

• Feature Type
  pseudogene
• IDs
  MGI:3644044
  NCBI Gene: 108167661
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:92357843-92358254 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 46.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644044	pseudogene	Chr1:92357606-92358340 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010244	pseudogene	Chr1:94010783-94011194 (-)
A/J	MGP_AJ_G0010238	pseudogene	Chr1:90639337-90639748 (-)
AKR/J	MGP_AKRJ_G0010209	pseudogene	Chr1:93325194-93325605 (-)
BALB/cJ	MGP_BALBcJ_G0010214	pseudogene	Chr1:90814956-90815367 (-)
C3H/HeJ	MGP_C3HHeJ_G0010151	pseudogene	Chr1:93530019-93530430 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010483	pseudogene	Chr1:97567459-97567870 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009200	pseudogene	Chr1:84873778-84874205 (-)
CAST/EiJ	MGP_CASTEiJ_G0009977	pseudogene	Chr1:92873600-92874010 (-)
CBA/J	MGP_CBAJ_G0010120	pseudogene	Chr1:100721469-100721880 (-)
DBA/2J	MGP_DBA2J_G0010152	pseudogene	Chr1:89841745-89842156 (-)
FVB/NJ	MGP_FVBNJ_G0010171	pseudogene	Chr1:88897757-88898168 (-)
LP/J	MGP_LPJ_G0010233	pseudogene	Chr1:95190588-95190999 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010132	pseudogene	Chr1:103907404-103907815 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010449	pseudogene	Chr1:93339329-93339740 (-)
PWK/PhJ	MGP_PWKPhJ_G0009881	pseudogene	Chr1:89272832-89273246 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009698	pseudogene	Chr1:92284166-92284585 (-)
WSB/EiJ	MGP_WSBEiJ_G0010041	pseudogene	Chr1:93147122-93147532 (-)

Homology

• Gene Tree
  Gm7837
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm7837
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000101522 (Evidence)
• NCBI Gene
  108167661

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101522	Ensembl Gene Model | MGI Sequence Detail	412	C57BL/6J
transcript	ENSMUST00000190873	Ensembl | MGI Sequence Detail	412	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm7837:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr12970	Chr1:92359891-92359917 (-)	-1,650 bp