Rps19-ps13 Pseudogene Detail

Summary

• Symbol
  Rps19-ps13
• Name
  ribosomal protein S19, pseudogene 13
• Synonyms
  Gm4838

• Feature Type
  pseudogene
• IDs
  MGI:3644135
  NCBI Gene: 225416
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:40859322-40859762 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 21.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644135	pseudogene	Chr18:40859292-40859799 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011441	pseudogene	Chr18:39316242-39316682 (+)
A/J	MGP_AJ_G0011435	pseudogene	Chr18:37953166-37953606 (+)
AKR/J	MGP_AKRJ_G0011399	pseudogene	Chr18:38963063-38963503 (+)
BALB/cJ	MGP_BALBcJ_G0011413	pseudogene	Chr18:37998151-37998591 (+)
C3H/HeJ	MGP_C3HHeJ_G0011301	pseudogene	Chr18:39049509-39049949 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011706	pseudogene	Chr18:40649978-40650418 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011108	pseudogene	Chr18:39005149-39005589 (+)
CBA/J	MGP_CBAJ_G0011277	pseudogene	Chr18:41884037-41884477 (+)
DBA/2J	MGP_DBA2J_G0011330	pseudogene	Chr18:37542433-37542873 (+)
FVB/NJ	MGP_FVBNJ_G0011336	pseudogene	Chr18:37217612-37218052 (+)
LP/J	MGP_LPJ_G0011401	pseudogene	Chr18:39348233-39348673 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011328	pseudogene	Chr18:43060904-43061344 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011692	pseudogene	Chr18:38845949-38846389 (+)
PWK/PhJ	MGP_PWKPhJ_G0010970	pseudogene	Chr18:37755425-37755865 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010792	pseudogene	Chr18:39074236-39074676 (+)
WSB/EiJ	MGP_WSBEiJ_G0011139	pseudogene	Chr18:38764377-38764817 (+)

Homology

• Gene Tree
  Rps19-ps13
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000095150 (Evidence)
• NCBI Gene
  225416

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000095150	Ensembl Gene Model | MGI Sequence Detail	441	C57BL/6J
transcript	ENSMUST00000180504	Ensembl | MGI Sequence Detail	441	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;