Gm7634 Pseudogene Detail

Summary

• Symbol
  Gm7634
• Name
  predicted gene 7634

• Feature Type
  pseudogene
• IDs
  MGI:3644198
  NCBI Gene: 665434
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr1:16123559-16124111 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 4.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644198	pseudogene	Chr1:16123535-16124143 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010008	pseudogene	Chr1:13520694-13524365 (+)
A/J	MGP_AJ_G0009989	pseudogene	Chr1:13379239-13379791 (+)
AKR/J	MGP_AKRJ_G0009972	pseudogene	Chr1:13395355-13395907 (+)
BALB/cJ	MGP_BALBcJ_G0009978	pseudogene	Chr1:13097596-13098148 (+)
C3H/HeJ	MGP_C3HHeJ_G0009909	pseudogene	Chr1:13397517-13398069 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010227	pseudogene	Chr1:14126238-14126790 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009006	pseudogene	Chr1:11999083-11999636 (+)
CAST/EiJ	MGP_CASTEiJ_G0009758	pseudogene	Chr1:13490093-13490646 (+)
CBA/J	MGP_CBAJ_G0009883	pseudogene	Chr1:14439570-14440122 (+)
DBA/2J	MGP_DBA2J_G0009905	pseudogene	Chr1:12967716-12968268 (+)
FVB/NJ	MGP_FVBNJ_G0009931	pseudogene	Chr1:12791991-12792543 (+)
LP/J	MGP_LPJ_G0009999	pseudogene	Chr1:13732195-13732747 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009891	pseudogene	Chr1:15098061-15098653 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010202	pseudogene	Chr1:13346096-13346648 (+)
PWK/PhJ	MGP_PWKPhJ_G0009662	pseudogene	Chr1:12771531-12772196 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009480	pseudogene	Chr1:13538119-13538662 (+)
WSB/EiJ	MGP_WSBEiJ_G0009819	pseudogene	Chr1:13288212-13288764 (+)

Homology

• Gene Tree
  Gm7634
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000100652 (Evidence)
• NCBI Gene
  665434

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100652	Ensembl Gene Model | MGI Sequence Detail	553	C57BL/6J
transcript	ENSMUST00000185778	Ensembl | MGI Sequence Detail	553	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7634:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5991	Chr1:16121776-16121778 (+)	-1,782 bp
Tssr5992	Chr1:16123523-16123524 (+)	-35 bp