Gm8993 Pseudogene Detail

Summary

• Symbol
  Gm8993
• Name
  predicted gene 8993

• Feature Type
  pseudogene
• IDs
  MGI:3644225
  NCBI Gene: 668136
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:75179054-75179822 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 32.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644225	pseudogene	Chr6:75178971-75179953 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013555	pseudogene	Chr6:75901892-75902874 (+)
A/J	MGP_AJ_G0013538	pseudogene	Chr6:72883050-72884032 (+)
AKR/J	MGP_AKRJ_G0013499	pseudogene	Chr6:75050553-75051534 (+)
BALB/cJ	MGP_BALBcJ_G0013517	pseudogene	Chr6:72969468-72970449 (+)
C3H/HeJ	MGP_C3HHeJ_G0013418	pseudogene	Chr6:109191349-109192331 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013905	pseudogene	Chr6:77894222-77895204 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011950	pseudogene	Chr6:71875476-71876469 (+)
CAST/EiJ	MGP_CASTEiJ_G0013060	pseudogene	Chr6:74953302-74954283 (+)
CBA/J	MGP_CBAJ_G0013337	pseudogene	Chr6:81052172-81053154 (+)
DBA/2J	MGP_DBA2J_G0013417	pseudogene	Chr6:72282850-72283832 (+)
FVB/NJ	MGP_FVBNJ_G0013417	pseudogene	Chr6:71645425-71646407 (+)
LP/J	MGP_LPJ_G0013491	pseudogene	Chr6:75840084-75841066 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013428	pseudogene	Chr6:84614538-84615519 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013897	pseudogene	Chr6:74888743-74889725 (+)
PWK/PhJ	MGP_PWKPhJ_G0012867	pseudogene	Chr6:71230150-71231131 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012649	pseudogene	Chr6:73628135-73629128 (+)
WSB/EiJ	MGP_WSBEiJ_G0013111	pseudogene	Chr6:75269664-75270646 (+)

Homology

• Gene Tree
  Gm8993
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097957 (Evidence)
• NCBI Gene
  668136

Representative Sequences			Length	Strain/Species
genomic	668136	NCBI Gene Model | MGI Sequence Detail	769	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;