Gm8991 Pseudogene Detail

Summary

• Symbol
  Gm8991
• Name
  predicted pseudogene 8991

• Feature Type
  pseudogene
• IDs
  MGI:3644227
  NCBI Gene: 108169028
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:16934994-16936068 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 7.26 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644227	pseudogene	Chr5:16934613-16936104 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012826	pseudogene	Chr4:112648196-112649185 (-)
A/J	MGP_AJ_G0012811	pseudogene	Chr4:108561477-108562466 (-)
AKR/J	MGP_AKRJ_G0012781	pseudogene	Chr4:111284684-111285674 (-)
BALB/cJ	MGP_BALBcJ_G0012792	pseudogene	Chr4:108791333-108792323 (-)
C3H/HeJ	MGP_C3HHeJ_G0012648	pseudogene	Chr4:112000425-112001415 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013123	pseudogene	Chr4:116708139-116709127 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012401	pseudogene	Chr4:109871775-109872761 (-)
CBA/J	MGP_CBAJ_G0012624	pseudogene	Chr4:120506603-120507593 (-)
DBA/2J	MGP_DBA2J_G0012687	pseudogene	Chr4:108224935-108225924 (-)
FVB/NJ	MGP_FVBNJ_G0012690	pseudogene	Chr4:107047208-107048197 (-)
LP/J	MGP_LPJ_G0012761	pseudogene	Chr4:112930026-112931015 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012700	pseudogene	Chr4:125920849-125921839 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013134	pseudogene	Chr4:111515381-111516371 (-)
PWK/PhJ	MGP_PWKPhJ_G0012223	pseudogene	Chr4:106469127-106470119 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012031	pseudogene	Chr4:108873814-108874890 (-)
WSB/EiJ	MGP_WSBEiJ_G0012428	pseudogene	Chr4:111754369-111755361 (-)

Homology

• Gene Tree
  Gm8991
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm8991
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000059179 (Evidence)
• NCBI Gene
  108169028

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000059179	Ensembl Gene Model | MGI Sequence Detail	1075	C57BL/6J
transcript	ENSMUST00000073014	Ensembl | MGI Sequence Detail	1075	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17