Gm8146 Pseudogene Detail

Summary

• Symbol
  Gm8146
• Name
  predicted gene 8146

• Feature Type
  pseudogene
• IDs
  MGI:3644273
  NCBI Gene: 666519
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:181109611-181111457 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 84.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644273	pseudogene	Chr1:181109600-181111654 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010458	pseudogene	Chr1:187789683-187791529 (+)
A/J	MGP_AJ_G0010445	pseudogene	Chr1:180188398-180190578 (+)
AKR/J	MGP_AKRJ_G0010415	pseudogene	Chr1:185539029-185540875 (+)
BALB/cJ	MGP_BALBcJ_G0010423	pseudogene	Chr1:180824414-180827277 (+)
C3H/HeJ	MGP_C3HHeJ_G0010352	pseudogene	Chr1:186326962-186328808 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010695	pseudogene	Chr1:193891611-193893789 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012139	pseudogene	Chr7:29888893-29896801 (-)
CAST/EiJ	MGP_CASTEiJ_G0010173	pseudogene	Chr1:185675215-185677067 (+)
CBA/J	MGP_CBAJ_G0010320	pseudogene	Chr1:201051607-201053453 (+)
DBA/2J	MGP_DBA2J_G0010351	pseudogene	Chr1:179006817-179009165 (+)
FVB/NJ	MGP_FVBNJ_G0010375	pseudogene	Chr1:177120627-177122931 (+)
LP/J	MGP_LPJ_G0010440	pseudogene	Chr1:189039217-189041304 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010338	pseudogene	Chr1:208188161-208190007 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010665	pseudogene	Chr1:185325632-185328804 (+)
PWK/PhJ	MGP_PWKPhJ_G0010074	pseudogene	Chr1:178136729-178138680 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009889	pseudogene	Chr1:184290660-184292517 (+)
WSB/EiJ	MGP_WSBEiJ_G0010244	pseudogene	Chr1:185526736-185530327 (+)

Homology

• Gene Tree
  Gm8146
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm8146
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000103260 (Evidence)
• NCBI Gene
  666519

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103260	Ensembl Gene Model | MGI Sequence Detail	1847	C57BL/6J
transcript	ENSMUST00000192106	Ensembl | MGI Sequence Detail	1847	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8146:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr328	Chr1:181109599-181109605 (+)	-9 bp