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Gm5069 Pseudogene Detail
Summary
  • Symbol
    Gm5069
  • Name
    predicted pseudogene 5069
  • Feature Type
    pseudogene
  • IDs
    MGI:3644516
    NCBI Gene: 277333
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:180154739-180155749 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 84.26 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    114 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644516
 pseudogene Chr1:180154534-180158114 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039647
 pseudogene Chr1:186746475-186753116 (-)
A/J MGP_AJ_G0039646
 pseudogene Chr1:179201514-179205156 (-)
AKR/J MGP_AKRJ_G0039571
 pseudogene Chr1:184527611-184536000 (-)
BALB/cJ MGP_BALBcJ_G0039619
 pseudogene Chr1:179823456-179827289 (-)
C3H/HeJ MGP_C3HHeJ_G0039282
 pseudogene Chr1:185293682-185297142 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0036818
 pseudogene Chr1:170181665-170185248 (-)
CAST/EiJ MGP_CASTEiJ_G0038401
 pseudogene Chr1:184620840-184627443 (-)
CBA/J MGP_CBAJ_G0039251
 pseudogene Chr1:199933469-199938863 (-)
DBA/2J MGP_DBA2J_G0039444
 pseudogene Chr1:178042175-178046279 (-)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0039402
 pseudogene Chr1:207131615-207135574 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040277
 pseudogene Chr1:184301134-184306547 (-)
PWK/PhJ MGP_PWKPhJ_G0038078
 pseudogene Chr1:177129277-177133115 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037827
 pseudogene Chr1:183237896-183245821 (-)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055676 Ensembl Gene Model | MGI Sequence Detail 1011 C57BL/6J ±  kb
transcript ENSMUST00000192714 Ensembl | MGI Sequence Detail 1011 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 4
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory