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Gm4984 Pseudogene Detail
Summary
  • Symbol
    Gm4984
  • Name
    predicted pseudogene 4984
Location &
Maps
more
  • Sequence Map
    ChrX:12518542-12518901 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 7.49 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    97 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644533
 pseudogene ChrX:12518492-12519064 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014310
 pseudogene ChrX:7475507-7475866 (+)
A/J MGP_AJ_G0014320
 pseudogene ChrX:7578706-7579065 (+)
AKR/J MGP_AKRJ_G0014247
 pseudogene ChrX:7800580-7800939 (+)
BALB/cJ MGP_BALBcJ_G0014268
 pseudogene ChrX:7431193-7431552 (+)
C3H/HeJ MGP_C3HHeJ_G0014103
 pseudogene ChrX:7578317-7578676 (+)
C57BL/6NJ MGP_C57BL6NJ_G0014728
 pseudogene ChrX:7666501-7666860 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012525
 pseudogene ChrX:6502783-6503142 (+)
CAST/EiJ MGP_CASTEiJ_G0013743
 pseudogene ChrX:7325590-7325949 (+)
CBA/J MGP_CBAJ_G0014088
 pseudogene ChrX:8060282-8060641 (+)
DBA/2J MGP_DBA2J_G0014166
 pseudogene ChrX:7418762-7419121 (+)
FVB/NJ MGP_FVBNJ_G0014165
 pseudogene ChrX:7252460-7252819 (+)
LP/J MGP_LPJ_G0014262
 pseudogene ChrX:7664868-7665227 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0014204
 pseudogene ChrX:7982904-7983263 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014697
 pseudogene ChrX:7400073-7400432 (+)
PWK/PhJ MGP_PWKPhJ_G0013561
 pseudogene ChrX:6925575-6925934 (+)
SPRET/EiJ MGP_SPRETEiJ_G0013350
 pseudogene ChrX:7494291-7494650 (+)
WSB/EiJ MGP_WSBEiJ_G0013812
 pseudogene ChrX:7465508-7465867 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype reference
Male mice homozygous for a null allele exhibit normal fertility.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      25
    • RefSeq
      2
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000079871 Ensembl Gene Model | MGI Sequence Detail 360 C57BL/6J ±  kb
    transcript ENSMUST00000115987 Ensembl | MGI Sequence Detail 360 Not Applicable  
    polypeptide NP_001094954 RefSeq | MGI Sequence Detail 119 C57BL/6  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 2
      cDNA 2

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2147884
    References
    more
    • Summaries
      All 11
      Phenotypes 1
    • Earliest
      J:348447 Nguyen TTT, et al., Gene-deficient mouse model established by CRISPR/Cas9 system reveals 15 reproductive organ-enriched genes dispensable for male fertility. Frontiers in Cell and Developmental Biology. 2024;12
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    06/12/2024
    MGI 6.13     		The Jackson Laboratory