Gm6119 Pseudogene Detail

Summary

• Symbol
  Gm6119
• Name
  predicted gene 6119

• Feature Type
  pseudogene
• IDs
  MGI:3644547
  NCBI Gene: 619980
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:4762442-4763647 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 1.77 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644547	pseudogene	Chr1:4762284-4763847 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0009962	pseudogene	Chr1:1726756-1727961 (-)
A/J	MGP_AJ_G0009943	pseudogene	Chr1:1804548-1805861 (-)
AKR/J	MGP_AKRJ_G0009926	pseudogene	Chr1:1780709-1781914 (-)
BALB/cJ	MGP_BALBcJ_G0009931	pseudogene	Chr1:1735342-1736547 (-)
C3H/HeJ	MGP_C3HHeJ_G0009859	pseudogene	Chr1:1753122-1754327 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010176	pseudogene	Chr1:1808357-1809562 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008965	pseudogene	Chr1:1495787-1497012 (-)
CAST/EiJ	MGP_CASTEiJ_G0009715	pseudogene	Chr1:1934848-1936054 (-)
CBA/J	MGP_CBAJ_G0009835	pseudogene	Chr1:1925281-1926486 (-)
DBA/2J	MGP_DBA2J_G0009859	pseudogene	Chr1:1706918-1708123 (-)
FVB/NJ	MGP_FVBNJ_G0009886	pseudogene	Chr1:1681054-1682259 (-)
LP/J	MGP_LPJ_G0009956	pseudogene	Chr1:1899223-1900428 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009845	pseudogene	Chr1:2104737-2105942 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010154	pseudogene	Chr1:1741935-1743140 (-)
PWK/PhJ	MGP_PWKPhJ_G0009621	pseudogene	Chr1:1645472-1646677 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009438	pseudogene	Chr1:1918657-1919865 (-)
WSB/EiJ	MGP_WSBEiJ_G0009779	pseudogene	Chr1:1735841-1737046 (-)

Homology

• Gene Tree
  Gm6119
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102175 (Evidence)
• NCBI Gene
  619980

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102175	Ensembl Gene Model | MGI Sequence Detail	1206	C57BL/6J
transcript	ENSMUST00000193443	Ensembl | MGI Sequence Detail	1206	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;