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Uba52-ps Pseudogene Detail
Summary
  • Symbol
    Uba52-ps
  • Name
    ubitquitin A-52 residue ribosomal protein fusion product 1, pseudogene
  • Synonyms
    Gm7866
  • Feature Type
    pseudogene
  • IDs
    MGI:3644625
    NCBI Gene: 665964
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:72081862-72082240 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 40.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    120 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644625
 pseudogene Chr9:72081777-72082282 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014160
 pseudogene Chr9:72319899-72321335 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0014102
 pseudogene Chr9:71463875-71464204 (-)
BALB/cJ MGP_BALBcJ_G0014127
 pseudogene Chr9:69503919-69504261 (-)
C3H/HeJ MGP_C3HHeJ_G0013958
 pseudogene Chr9:71969127-71969505 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014571
 pseudogene Chr9:74221906-74223889 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0013941
 pseudogene Chr9:76796571-76796949 (-)
DBA/2J MGP_DBA2J_G0014024
 pseudogene Chr9:69517676-69518054 (-)
FVB/NJ MGP_FVBNJ_G0014023
 pseudogene Chr9:68837204-68837582 (-)
LP/J MGP_LPJ_G0014107
 pseudogene Chr9:72524560-72526464 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0014052
 pseudogene Chr9:77850329-77850707 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014544
 pseudogene Chr9:71602496-71602874 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    UBA52, ubiquitin A-52 residue ribosomal protein fusion product 1
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBA52, ubiquitin A-52 residue ribosomal protein fusion product 1
  • Synonyms
    CEP52, HUBCEP52, L40, RPL40
  • Links
    NCBI Gene ID: 7311
    neXtProt AC: NX_P62987
    UniProt: P62987

  • Chr Location
    19p13.11; chr19:18563766-18577550 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061390 Ensembl Gene Model | MGI Sequence Detail 379 C57BL/6J ±  kb
transcript ENSMUST00000183770 Ensembl | MGI Sequence Detail 379 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:5908150
References
more
  • Summaries
    All 9
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory