Gm7867 Pseudogene Detail

Summary

• Symbol
  Gm7867
• Name
  predicted gene 7867

• Feature Type
  pseudogene
• IDs
  MGI:3644627
  NCBI Gene: 108167665
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:93234416-93234961 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 47.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644627	pseudogene	Chr1:93234383-93234996 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010246	pseudogene	Chr1:94924703-94925248 (-)
A/J	MGP_AJ_G0010240	pseudogene	Chr1:91524630-91525175 (-)
AKR/J	MGP_AKRJ_G0010211	pseudogene	Chr1:94225472-94226017 (-)
BALB/cJ	MGP_BALBcJ_G0010216	pseudogene	Chr1:91706185-91706730 (-)
C3H/HeJ	MGP_C3HHeJ_G0010153	pseudogene	Chr1:94480048-94480593 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010485	pseudogene	Chr1:98539036-98539581 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009202	pseudogene	Chr1:85773468-85774022 (-)
CAST/EiJ	MGP_CASTEiJ_G0009979	pseudogene	Chr1:93809458-93810003 (-)
CBA/J	MGP_CBAJ_G0010122	pseudogene	Chr1:101727854-101728399 (-)
DBA/2J	MGP_DBA2J_G0010154	pseudogene	Chr1:90719942-90720487 (-)
FVB/NJ	MGP_FVBNJ_G0010173	pseudogene	Chr1:89794447-89794992 (-)
LP/J	MGP_LPJ_G0010235	pseudogene	Chr1:96103564-96104109 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010134	pseudogene	Chr1:104836894-104837439 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010451	pseudogene	Chr1:94242399-94242944 (-)
PWK/PhJ	MGP_PWKPhJ_G0009883	pseudogene	Chr1:90157867-90158412 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009700	pseudogene	Chr1:93193564-93194109 (-)
WSB/EiJ	MGP_WSBEiJ_G0010043	pseudogene	Chr1:94061353-94061898 (-)

Homology

• Gene Tree
  Gm7867
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm7867
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000100351 (Evidence)
• NCBI Gene
  108167665

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100351	Ensembl Gene Model | MGI Sequence Detail	546	C57BL/6J
transcript	ENSMUST00000189856	Ensembl | MGI Sequence Detail	546	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm7867:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr13014	Chr1:93234990-93234999 (-)	-34 bp