Gm6071 Pseudogene Detail

Summary

• Symbol
  Gm6071
• Name
  predicted gene 6071

• Feature Type
  pseudogene
• IDs
  MGI:3644647
  NCBI Gene: 606544
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:22172039-22172513 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 16.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  74 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644647	pseudogene	ChrX:22171836-22172539 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014352	pseudogene	ChrX:17205785-17206259 (-)
A/J	MGP_AJ_G0014362	pseudogene	ChrX:17272768-17273242 (-)
AKR/J	MGP_AKRJ_G0014288	pseudogene	ChrX:17913124-17913598 (-)
BALB/cJ	MGP_BALBcJ_G0014312	pseudogene	ChrX:17067625-17068048 (-)
C3H/HeJ	MGP_C3HHeJ_G0014147	pseudogene	ChrX:17440289-17440763 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014772	pseudogene	ChrX:17720536-17721010 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012559	pseudogene	ChrX:15544098-15544577 (-)
CAST/EiJ	MGP_CASTEiJ_G0013787	pseudogene	ChrX:16728022-16728496 (-)
CBA/J	MGP_CBAJ_G0014131	pseudogene	ChrX:18497747-18498221 (-)
DBA/2J	MGP_DBA2J_G0014209	pseudogene	ChrX:17111904-17112378 (-)
FVB/NJ	MGP_FVBNJ_G0014210	pseudogene	ChrX:16993441-16993915 (-)
LP/J	MGP_LPJ_G0014303	pseudogene	ChrX:17504376-17504850 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014245	pseudogene	ChrX:18843947-18844421 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014743	pseudogene	ChrX:17177690-17178175 (-)
PWK/PhJ	MGP_PWKPhJ_G0013603	pseudogene	ChrX:16226336-16226810 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013395	pseudogene	ChrX:17128434-17128907 (-)
WSB/EiJ	MGP_WSBEiJ_G0013852	pseudogene	ChrX:17004630-17005104 (-)

Homology

• Gene Tree
  Gm6071
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081064 (Evidence)
• NCBI Gene
  606544

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081064	Ensembl Gene Model | MGI Sequence Detail	475	C57BL/6J
transcript	ENSMUST00000119561	Ensembl | MGI Sequence Detail	440	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;