Gm9226 Pseudogene Detail

Summary

• Symbol
  Gm9226
• Name
  predicted gene 9226

• Feature Type
  pseudogene
• IDs
  MGI:3644713
  NCBI Gene: 668531
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:38923345-38926833 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 25.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644713	pseudogene	Chr7:38923165-38926833 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0013888	pseudogene	Chr7:37558294-37561888 (-)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014277	pseudogene	Chr7:42676404-42684389 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0013669	pseudogene	Chr7:44435746-44439124 (+)
DBA/2J	MGP_DBA2J_G0013751	pseudogene	Chr7:40027220-40031168 (+)
FVB/NJ	MGP_FVBNJ_G0013747	pseudogene	Chr7:39741247-39744529 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0013772	pseudogene	Chr7:43223911-43231570 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm9226
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  12
• RefSeq
  2

• Ensembl
  ENSMUSG00000099951 (Evidence)
• NCBI Gene
  668531

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099951	Ensembl Gene Model | MGI Sequence Detail	3489	C57BL/6J
transcript	ENSMUST00000188352	Ensembl | MGI Sequence Detail	3489	Not Applicable

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;